RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FBXL6Q8N531 539 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 PTGR2Q8N8N7 351 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 MFSD2AQ8NA29 543 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 FBXO15Q8NCQ5 510 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 UBTD2Q8WUN7 234 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 SREK1Q8WXA9 508 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 EXT2Q93063 718 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 KLHDC7BQ96G42 594 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 HSPA12BQ96MM6 686 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 C7orf26Q96N11 449 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 TMEM237Q96Q45 408 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 C1QTNF3Q9BXJ4 246 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 ZDHHC5Q9C0B5 715 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 CARS2Q9HA77 564 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 PARVBQ9HBI1 364 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 CYP4F12Q9HCS2 524 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 SLCO1B3Q9NPD5 702 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 KLC4Q9NSK0 619 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 FBXO4Q9UKT5 387 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 ACSL5Q9ULC5 683 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 PLEKHM1Q9Y4G2 1056 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 CACNA1HO95180 2353 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 ARHGEF33A8MVX0 844 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 FFAR2O15552 330 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 MAP3K13O43283 966 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 NPHS1O60500 1241 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 RPS17P08708 135 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 NEFHP12036 1026 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 VCLP18206 1134 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 NAGLUP54802 743 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 ALDH18A1P54886 795 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 RACK1P63244 317 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 OVGP1Q12889 678 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 ABRQ12979 859 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 LRP8Q14114 963 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 SETDB1Q15047 1291 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 PFKFB4Q16877 469 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 UNC50Q53HI1 259 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 ZNF678Q5SXM1 525 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 FRA10AC1Q70Z53 315 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 CHST15Q7LFX5 561 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 C11orf74Q86VG3 221 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 TMEFF1Q8IYR6 380 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 GAB3Q8WWW8 586 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 TSACCQ96A04 125 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 RMDN2Q96LZ7 410 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 SORT1Q99523 831 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 C20orf27Q9GZN8 174 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 TM9SF3Q9HD45 589 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 AASDHPPTQ9NRN7 309 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 CD274Q9NZQ7 290 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 MOSPD1Q9UJG1 213 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 PTBP2Q9UKA9 531 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 DNAJC16Q9Y2G8 782 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 GPSM3Q9Y4H4 160 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 ST14Q9Y5Y6 855 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 TMEM131Q92545 1883 aa14.4□□□□□ -0.1
SHKBP1-211ENST00000595945 TAPBPO15533 448 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 ITM2AO43736 263 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 LYPLA1O75608 230 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 VIMP08670 466 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 GFAPP14136 432 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 CYP2A7P20853 494 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 MAOBP27338 520 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 CD38P28907 300 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 SERPINB5P36952 375 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 AP1S2P56377 157 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 ABCE1P61221 599 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 HERVK_113P63132 956 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 GABPB1Q06547 395 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 RCN2Q14257 317 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 PCBP2Q15366 365 aaKnown RBP eCLIP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 WDR45BQ5MNZ6 344 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 CAPRIN2Q6IMN6 1127 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 CGB2Q6NT52 195 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 UNC5DQ6UXZ4 953 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 FRMD7Q6ZUT3 714 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 FAM47EQ6ZV65 393 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 LSMEM2Q8N112 164 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 PPP1R14CQ8TAE6 165 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 RHBDF1Q96CC6 855 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 PHF21BQ96EK2 531 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 ERVK-6Q9BXR3 956 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 DRC3Q9H069 523 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 GSTO2Q9H4Y5 243 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 ZNF395Q9H8N7 513 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 FGFR1OP2Q9NVK5 253 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 THAP1Q9NVV9 213 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 TRNAU1APQ9NX07 287 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 UTP6Q9NYH9 597 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 KCNK6Q9Y257 313 aa14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 GOLGA4Q13439 2230 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-211ENST00000595945 ARID1BQ8NFD5 2236 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 LRRC14BA6NHZ5 514 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 GPR37L1O60883 481 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 RASGRP1O95267 797 aa14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 SIX3O95343 332 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-211ENST00000595945 C1orf105O95561 183 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms