RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 RIMS3Q9UJD0 308 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 CCL27Q9Y4X3 112 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 FAM234BA2RU67 622 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 ASPDHA6ND91 283 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 CCDC154A6NI56 674 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 FADS2P1A8MWK0 482 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 NME4O00746 187 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 SGTAO43765 313 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 EEDO75530 441 aaKnown RBP17.76■□□□□ 0.43
SMPD3-211ENST00000568373 ADGRE1Q14246 886 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 AP5B1Q2VPB7 878 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 ZNF284Q2VY69 593 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 FAM78AQ5JUQ0 283 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 TECPR1Q7Z6L1 1165 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 NPAS3Q8IXF0 933 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 SLC15A3Q8IY34 581 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 PLCD3Q8N3E9 789 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 TCAIMQ8N3R3 496 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 PROKR1Q8TCW9 393 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 BPIFB1Q8TDL5 484 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 TIFAQ96CG3 184 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 LRGUKQ96M69 825 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 LOC730098B7Z3J9 87 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 WDR47O94967 919 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 SLC6A2P23975 617 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 RHDQ02161 417 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 MESP2Q0VG99 397 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 SP140Q13342 867 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 CAPRIN1Q14444 709 aaKnown RBP17.75■□□□□ 0.43
SMPD3-211ENST00000568373 ERAP2Q6P179 960 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 PARS2Q7L3T8 475 aaKnown RBP17.75■□□□□ 0.43
SMPD3-211ENST00000568373 NXPE3Q969Y0 559 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 ZFYVE19Q96K21 471 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 PPP3R2Q96LZ3 170 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 ASB16Q96NS5 453 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 EBF3Q9H4W6 596 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 SLC32A1Q9H598 525 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 COPS7BQ9H9Q2 264 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-211ENST00000568373 RNF11Q9Y3C5 154 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 C2orf16Q68DN1 1984 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 PRRT4C9JH25 899 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 GFYI3L273 518 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 FFAR3O14843 346 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 SLC16A5O15375 505 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 GPR42O15529 346 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 PAPLNO95428 1278 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 NFATC1O95644 943 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 FTH1P02794 183 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 HIST1H2AGP0C0S8 130 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-211ENST00000568373 ELFN1P0C7U0 828 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 HIST1H2ADP20671 130 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 IL12AP29459 219 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 ERVK-21P61565 698 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 PRKG2Q13237 762 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 NFYCQ13952 458 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 GRAMD1BQ3KR37 738 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 RARS2Q5T160 578 aaKnown RBP17.75■□□□□ 0.43
SMPD3-211ENST00000568373 LIPIQ6XZB0 460 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 LRRC70Q7Z2Q7 622 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 HOMEZQ8IX15 550 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 LILRA2Q8N149 483 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 BTN2A2Q8WVV5 523 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 ELMO1Q92556 727 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 HIST1H2AHQ96KK5 128 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 HIST1H2AJQ99878 128 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 H2AFJQ9BTM1 129 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 KLQ9UEF7 1012 aa17.75■□□□□ 0.43
SMPD3-211ENST00000568373 LEF1Q9UJU2 399 aaPredicted RBP17.75■□□□□ 0.43
SMPD3-211ENST00000568373 C5orf42Q9H799 3197 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 KPNA3O00505 521 aaPredicted RBP17.74■□□□□ 0.43
SMPD3-211ENST00000568373 RGS14O43566 566 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 DNAJA2O60884 412 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 ULK1O75385 1050 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 G6PDP11413 515 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 HSD17B1P14061 328 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 HNMTP50135 292 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 AQP4P55087 323 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 MRPS35P82673 323 aaKnown RBP17.74■□□□□ 0.43
SMPD3-211ENST00000568373 GRIN2CQ14957 1233 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 TLR1Q15399 786 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 RFTN2Q52LD8 501 aaPredicted RBP17.74■□□□□ 0.43
SMPD3-211ENST00000568373 IL23RQ5VWK5 629 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 CYP20A1Q6UW02 462 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 NEK10Q6ZWH5 1172 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 TRIM46Q7Z4K8 759 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 ZFAND4Q86XD8 727 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 DHFR2Q86XF0 187 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 UCMAQ8WVF2 138 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 SMARCD2Q92925 531 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 PPP2R3CQ969Q6 453 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 VPS35Q96QK1 796 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 SLC29A3Q9BZD2 475 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 CMTM6Q9NX76 183 aa17.74■□□□□ 0.43
SMPD3-211ENST00000568373 TCRBV3S1A0A5B6 114 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 DYTNA2CJ06 578 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 PABPN1LA6NDY0 278 aaKnown RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 EIF4E1BA6NMX2 242 aaKnown RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 SLC28A1O00337 649 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 QSOX1O00391 747 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 STAMBPO95630 424 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms