RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 TRIM58Q8NG06 486 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 OR52E1Q8NGJ3 308 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 OR4L1Q8NH43 312 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 LCN9Q8WX39 176 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 TFGQ92734 400 aaPredicted RBP14.24□□□□□ -0.13
FANCA-220ENST00000566409 KIAA1143Q96AT1 154 aaPredicted RBP14.24□□□□□ -0.13
FANCA-220ENST00000566409 ARHGAP9Q9BRR9 750 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 TFB2MQ9H5Q4 396 aaKnown RBP14.24□□□□□ -0.13
FANCA-220ENST00000566409 CHRAC1Q9NRG0 131 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 FGF21Q9NSA1 209 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 STARD5Q9NSY2 213 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 LNPEPQ9UIQ6 1025 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 CROTQ9UKG9 612 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 POMT2Q9UKY4 750 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 ZKSCAN5Q9Y2L8 839 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 TCAF1Q9Y4C2 921 aa14.24□□□□□ -0.13
FANCA-220ENST00000566409 SLC5A10A0PJK1 596 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 SLC9B1P1A6NJY1 282 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 BTN3A1O00481 513 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 CEP104O60308 925 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 ZBTB11O95625 1053 aaPredicted RBP14.23□□□□□ -0.13
FANCA-220ENST00000566409 GSTM1P09488 218 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 PRKAR1AP10644 381 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 CRADDP78560 199 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 GSTM4Q03013 218 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 BRD3Q15059 726 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 GPR19Q15760 415 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 BORAQ6PGQ7 559 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 AFTPHQ6ULP2 937 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 LDB1Q86U70 411 aaPredicted RBP14.23□□□□□ -0.13
FANCA-220ENST00000566409 ADGRF3Q8IZF5 1079 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 PRELID2Q8N945 189 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 SLC38A9Q8NBW4 561 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 OR5AR1Q8NGP9 310 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 STARD8Q92502 1023 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 ELMO1Q92556 727 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 ZNF501Q96CX3 271 aaPredicted RBP14.23□□□□□ -0.13
FANCA-220ENST00000566409 SGSM3Q96HU1 749 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 SRMSQ9H3Y6 488 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 XKR8Q9H6D3 395 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 MVB12BQ9H7P6 319 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 VPS37BQ9H9H4 285 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 PDE7BQ9NP56 450 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 EIF2B3Q9NR50 452 aaKnown RBP14.23□□□□□ -0.13
FANCA-220ENST00000566409 MARCH4Q9P2E8 410 aaPredicted RBP14.23□□□□□ -0.13
FANCA-220ENST00000566409 RARRES3Q9UL19 164 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 BTRCQ9Y297 605 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 SPENQ96T58 3664 aaKnown RBP14.23□□□□□ -0.13
FANCA-220ENST00000566409 NBASA2RRP1 2371 aa14.23□□□□□ -0.13
FANCA-220ENST00000566409 UBR5O95071 2799 aaPredicted RBP14.22□□□□□ -0.13
FANCA-220ENST00000566409 FER1L5A0AVI2 2057 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 TCRBV7S3A2A0A539 114 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 IFRD1O00458 451 aaPredicted RBP14.22□□□□□ -0.13
FANCA-220ENST00000566409 LIN7AO14910 233 aaPredicted RBP14.22□□□□□ -0.13
FANCA-220ENST00000566409 GAS8O95995 478 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 NTRK1P04629 796 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 FURINP09958 794 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 PRDX3P30048 256 aaKnown RBP14.22□□□□□ -0.13
FANCA-220ENST00000566409 DLSTP36957 453 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 SESN2P58004 480 aaPredicted RBP14.22□□□□□ -0.13
FANCA-220ENST00000566409 TUBB4BP68371 445 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 NFKB2Q00653 900 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 ACY1Q03154 408 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 CDC20Q12834 499 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 NFATC3Q12968 1075 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 TUBB2AQ13885 445 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 ARMC6Q6NXE6 501 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 NLRP9Q7RTR0 991 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 CARFQ8N187 725 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 OR6P1Q8NGX9 317 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 LKAAEAR1Q8TD35 194 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 STAMBPL1Q96FJ0 436 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 FCRL4Q96PJ5 515 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 HGH1Q9BTY7 390 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 EFHD1Q9BUP0 239 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 TUBB2BQ9BVA1 445 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 PITPNM3Q9BZ71 974 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 LHX9Q9NQ69 397 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 ASH1LQ9NR48 2969 aaKnown RBP14.22□□□□□ -0.13
FANCA-220ENST00000566409 TREX1Q9NSU2 369 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 GEMIN8Q9NWZ8 242 aaKnown RBP14.22□□□□□ -0.13
FANCA-220ENST00000566409 PADI1Q9ULC6 663 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 ICKQ9UPZ9 632 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 CDYLQ9Y232 598 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 MED13Q9UHV7 2174 aa14.22□□□□□ -0.13
FANCA-220ENST00000566409 GSAPA4D1B5 854 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 IQCF5A8MTL0 148 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 FTH1P02794 183 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 OR56A5P0C7T3 313 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 ST6GAL1P15907 406 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 NMBRP28336 390 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 CCR7P32248 378 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 ARL4DP49703 201 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 POLE2P56282 527 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 BASP1P80723 227 aaKnown RBP14.21□□□□□ -0.13
FANCA-220ENST00000566409 PRKAA1Q13131 559 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 LAMB3Q13751 1172 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 CRTC2Q53ET0 693 aaPredicted RBP14.21□□□□□ -0.13
FANCA-220ENST00000566409 PCID2Q5JVF3 399 aa14.21□□□□□ -0.13
FANCA-220ENST00000566409 PRAMEF17Q5VTA0 474 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms