RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 OR52A5Q9H2C5 316 aa10.77□□□□□ -0.69
DDB1-222ENST00000543627 CCDC68Q9H2F9 335 aa10.77□□□□□ -0.69
DDB1-222ENST00000543627 SLC24A2Q9UI40 661 aa10.77□□□□□ -0.69
DDB1-222ENST00000543627 DMXL2Q8TDJ6 3036 aa10.77□□□□□ -0.69
DDB1-222ENST00000543627 URB1O60287 2271 aaKnown RBP10.77□□□□□ -0.69
DDB1-222ENST00000543627 HGSO14964 777 aaPredicted RBP10.76□□□□□ -0.69
DDB1-222ENST00000543627 NIPSNAP2O75323 286 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 GSTM1P09488 218 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 CDH3P22223 829 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 ARNTP27540 789 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 CAPZBP47756 277 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 SH3BP2P78314 561 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 GSTM4Q03013 218 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 RPA4Q13156 261 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 TGIF1Q15583 401 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 MSS51Q4VC12 460 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 HSP90AA5PQ58FG0 334 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 DCAF12Q5T6F0 453 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 ANKS6Q68DC2 871 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 XKR5Q6UX68 686 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 PDZD3Q86UT5 571 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 HOOK3Q86VS8 718 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 VRK3Q8IV63 474 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 DENND6AQ8IWF6 608 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 PDIK1LQ8N165 341 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 AGGF1Q8N302 714 aaeCLIP10.76□□□□□ -0.69
DDB1-222ENST00000543627 C2orf73Q8N5S3 287 aaPredicted RBP10.76□□□□□ -0.69
DDB1-222ENST00000543627 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
DDB1-222ENST00000543627 ACVR1CQ8NER5 493 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 OR52E1Q8NGJ3 308 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 ASZ1Q8WWH4 475 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 PMEPA1Q969W9 287 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 SNF8Q96H20 258 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 CRELD1Q96HD1 420 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 PANX3Q96QZ0 392 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 MAP3K3Q99759 626 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 CARD6Q9BX69 1037 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 KLHL25Q9H0H3 589 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 TRIT1Q9H3H1 467 aaKnown RBP10.76□□□□□ -0.69
DDB1-222ENST00000543627 KIR3DX1Q9H7L2 352 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 KCND1Q9NSA2 647 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 SOHLH2Q9NX45 425 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 FOXJ2Q9P0K8 574 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 RALYQ9UKM9 306 aaKnown RBP10.76□□□□□ -0.69
DDB1-222ENST00000543627 CHMP2BQ9UQN3 213 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 PCDHB11Q9Y5F2 797 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 B3GALT1Q9Y5Z6 326 aa10.76□□□□□ -0.69
DDB1-222ENST00000543627 KMT2BQ9UMN6 2715 aaPredicted RBP10.76□□□□□ -0.69
DDB1-222ENST00000543627 COL27A1Q8IZC6 1860 aaPredicted RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 SLC5A10A0PJK1 596 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 OR5K3A6NET4 321 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 CDRT15L2A8MXV6 281 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 C9orf172C9J069 976 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 BHMG1C9JSJ3 638 aaPredicted RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 POLR1CO15160 346 aaPredicted RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 RAD51CO43502 376 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 DXOO77932 396 aaKnown RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 USP1O94782 785 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 ATXN8OSP0DMR3 200 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 ERVK-10P10266 1014 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 PGAM1P18669 254 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 ELK3P41970 407 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 RPL21P46778 160 aaKnown RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 CD151P48509 253 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 CARSP49589 748 aaKnown RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 ARL4CP56559 192 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 CXADRP78310 365 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 KCNAB1Q14722 419 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 MORF4L2Q15014 288 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 ZNF789Q5FWF6 425 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 CTSL3PQ5NE16 218 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 RNF187Q5TA31 235 aaPredicted RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 TTC23LQ6PF05 361 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 CNSTQ6PJW8 725 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 CAPN12Q6ZSI9 719 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 MAATS1Q7Z4T9 603 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 ARHGAP22Q7Z5H3 698 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 TAX1BP1Q86VP1 789 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 KCNMB4Q86W47 210 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 AMIGO1Q86WK6 493 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 RASGRP3Q8IV61 690 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 SPACA3Q8IXA5 215 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 SIDT2Q8NBJ9 832 aaKnown RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 SLCO2A1Q92959 643 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 SGSM3Q96HU1 749 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 OR6C1Q96RD1 312 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 EBNA1BP2Q99848 306 aaKnown RBP10.75□□□□□ -0.69
DDB1-222ENST00000543627 P2RY12Q9H244 342 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 MVB12BQ9H7P6 319 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 APMAPQ9HDC9 416 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 LHX6Q9UPM6 363 aa10.75□□□□□ -0.69
DDB1-222ENST00000543627 CELSR3Q9NYQ7 3312 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 PIKFYVEQ9Y2I7 2098 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 IGHV5-51A0A0C4DH38 117 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 ZCWPW2A0A1B0GU75 182 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 ISM1B1AKI9 464 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 BTN3A3O00478 584 aa10.74□□□□□ -0.69
DDB1-222ENST00000543627 NVLO15381 856 aaKnown RBP10.74□□□□□ -0.69
DDB1-222ENST00000543627 HAUS5O94927 633 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms