RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MLLT6P55198 1093 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 FBXO48Q5FWF7 155 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 C14orf80Q86SX3 495 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 MICU2Q8IYU8 434 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 POC5Q8NA72 575 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 CAPSLQ8WWF8 208 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 IPCEF1Q8WWN9 437 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.362e-7■■■■■ 32.6
RAB40C-205ENST00000539661 APOL4Q9BPW4 351 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 SP110Q9HB58 689 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 ADARB2Q9NS39 739 aaKnown RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 SLCO3A1Q9UIG8 710 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 UTS2RQ9UKP6 389 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 ARL5AQ9Y689 179 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 PLXNB2O15031 1838 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 PABPN1LA6NDY0 278 aaKnown RBP17.29■□□□□ 0.36
RAB40C-205ENST00000539661 AGAP5A6NIR3 686 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 EFCAB9A8MZ26 197 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 J3KR12 359 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 BTN3A1O00481 513 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 ENPP3O14638 875 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 KCNK2O95069 426 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 EPOP01588 193 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 FMO3P31513 532 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 CCDC81Q6ZN84 652 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 DPP9Q86TI2 863 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 GTF2H4Q92759 462 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 KLHL5Q96PQ7 755 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 DLGAP3O95886 979 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 PFKLP17858 780 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 IGFBP6P24592 240 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-205ENST00000539661 BMPR1AP36894 532 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 TGFBR2P37173 567 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 CASP3P42574 277 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 ERVPABLB-1P60509 514 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 ZNF45Q02386 682 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 STEAP3Q658P3 488 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 BLOC1S5Q8TDH9 187 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 HMCESQ96FZ2 354 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 CLSTN3Q9BQT9 956 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 SYT17Q9BSW7 474 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 NDEL1Q9GZM8 345 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 EVLQ9UI08 416 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-205ENST00000539661 FAM50BQ9Y247 325 aa17.29■□□□□ 0.36
RAB40C-205ENST00000539661 TIMM13Q9Y5L4 95 aaPredicted RBP17.29■□□□□ 0.36
RAB40C-205ENST00000539661 UBA6A0AVT1 1052 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 OR2A25A4D2G3 310 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 NCF1BA6NI72 391 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 METTL15A6NJ78 407 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 NCF1CA8MVU1 366 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 CREG1O75629 220 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 NCF1P14598 390 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 CD36P16671 472 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 RHOQP17081 205 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 ADAM17P78536 824 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 TRAF3Q13114 568 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 DGCR6Q14129 220 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 NR6A1Q15406 480 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 SMU1Q2TAY7 513 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 ATG9BQ674R7 924 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 PNCKQ6P2M8 343 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 CHPFQ8IZ52 775 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 GLB1L3Q8NCI6 653 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 ZNF540Q8NDQ6 660 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 OR13C4Q8NGS5 318 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 TMEM40Q8WWA1 233 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 FCGR1BQ92637 280 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 CCDC97Q96F63 343 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 DCSTAMPQ9H295 470 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 OPTCQ9UBM4 332 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 FBXO10Q9UK96 956 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 ZBBXA8MT70 800 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 A8MU76 341 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 FAM220BPB1ANY3 271 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 CXCL11O14625 94 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 KRT75O95678 551 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 CD9P21926 228 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 FMO4P31512 558 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 VAC14Q08AM6 782 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 RUNDC3AQ59EK9 446 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 UBE2UQ5VVX9 321 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 IL27RAQ6UWB1 636 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 PRR23CQ6ZRP0 262 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 GPSM1Q86YR5 675 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 LILRB4Q8NHJ6 448 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 DNAJB8Q8NHS0 232 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 METTL6Q8TCB7 284 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 PROX1Q92786 737 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 SLC38A4Q969I6 547 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 PPP3R2Q96LZ3 170 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 TP63Q9H3D4 680 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 NEK6Q9HC98 313 aa17.28■□□□□ 0.36
RAB40C-205ENST00000539661 EIF2B4Q9UI10 523 aaKnown RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 POLR3HQ9Y535 204 aaPredicted RBP17.28■□□□□ 0.36
RAB40C-205ENST00000539661 MBLAC1A4D2B0 266 aaPredicted RBP17.27■□□□□ 0.36
RAB40C-205ENST00000539661 FAM172BPA6NC97 362 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 CENPBD1B2RD01 187 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 FADS2O95864 444 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms