RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 IL1RL1Q01638 556 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CDK5R2Q13319 367 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 INAQ16352 499 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 SPANXN4Q5MJ08 99 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CATSPEREQ5SY80 951 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 DET1Q7L5Y6 550 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 EFL1Q7Z2Z2 1120 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NKAPQ8N5F7 415 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 OR7D4Q8NG98 312 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 OR7A2PQ8NGA2 310 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 MCOLN3Q8TDD5 553 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 SLC13A3Q8WWT9 602 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 BRI3BPQ8WY22 251 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 FATE1Q969F0 183 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 BTN2A3PQ96KV6 586 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 MYOCQ99972 504 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 RBM4BQ9BQ04 359 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 RBM4Q9BWF3 364 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 BTBD2Q9BX70 525 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GORASP2Q9H8Y8 452 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PRDM8Q9NQV8 689 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ATAD3AQ9NVI7 634 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GIN1Q9NXP7 522 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 RNF181Q9P0P0 153 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 FNIP2Q9P278 1114 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 KLQ9UEF7 1012 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NAALAD2Q9Y3Q0 740 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ZBBXA8MT70 800 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PRAMEF11O60813 436 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 VPS26AO75436 327 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GMNNO75496 209 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NDST3O95803 873 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 C1QCP02747 245 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 SLC2A4P14672 509 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 MC4RP32245 332 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 HMGCS1Q01581 520 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 SIM2Q14190 667 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PON2Q15165 354 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 SMN1Q16637 294 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NADSYN1Q6IA69 706 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 AFTPHQ6ULP2 937 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GCNT7Q6ZNI0 430 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 DCP2Q8IU60 420 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 THEM5Q8N1Q8 247 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 MS4A4AQ96JQ5 239 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF641Q96N77 438 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PDFQ9HBH1 243 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 TRPV2Q9Y5S1 764 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PRMT5O14744 637 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 KDM1AO60341 852 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GABARAPO95166 117 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GUCA1CO95843 209 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CD52P31358 61 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 MASP1P48740 699 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 IL2P60568 153 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CARTPTQ16568 116 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ZRANB3Q5FWF4 1079 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CHPFQ8IZ52 775 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 EFHBQ8N7U6 833 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 OR8J3Q8NGG0 315 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NETO1Q8TDF5 533 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 RPL3LQ92901 407 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PEX13Q92968 403 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ITPKCQ96DU7 683 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CCDC115Q96NT0 180 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 USE1Q9NZ43 259 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 INTS6Q9UL03 887 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PNMA8BQ9ULN7 279 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ELOVL7A1L3X0 281 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 M0QZ92 97 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 BCKDKO14874 412 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 ANGPTL1O95841 491 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 SERPINA1P01009 418 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 ITGB6P18564 788 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 GDF5P43026 501 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 SGO1Q5FBB7 561 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 B3GNT8Q7Z7M8 397 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 MON1AQ86VX9 555 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 LPCAT1Q8NF37 534 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 WDR12Q9GZL7 423 aaKnown RBP11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 PCDHGC4Q9Y5F7 938 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 PIKFYVEQ9Y2I7 2098 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 SLC12A8A0AV02 714 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 FADS2O95864 444 aaKnown RBP11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 PRLP01236 227 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 GSNP06396 782 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 HSPA7P48741 367 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 VAC14Q08AM6 782 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 GTF2H2Q13888 395 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 MAPRE1Q15691 268 aaKnown RBP11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 MAPKAPK3Q16644 382 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 C9orf131Q5VYM1 1079 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 GTF2H2CQ6P1K8 395 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 CYP4Z1Q86W10 505 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 EID3Q8N140 333 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 TTC30BQ8N4P2 665 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 ATP6V0D2Q8N8Y2 350 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms