RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 PRSS56P0CW18 603 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 CD151P48509 253 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 RPA4Q13156 261 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 UGT8Q16880 541 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 MICALCLQ6ZW33 695 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 SYVN1Q86TM6 617 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 TAB3Q8N5C8 712 aaPredicted RBP20.44■□□□□ 0.86
VSX1-206ENST00000444511 CLDN19Q8N6F1 224 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 PHC3Q8NDX5 983 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 STYXQ8WUJ0 223 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 CPT1BQ92523 772 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 CDKN2AIPNLQ96HQ2 116 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 TMEM121Q9BTD3 319 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 MVB12BQ9H7P6 319 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 PIH1D1Q9NWS0 290 aaKnown RBP20.44■□□□□ 0.86
VSX1-206ENST00000444511 TLK1Q9UKI8 766 aa20.44■□□□□ 0.86
VSX1-206ENST00000444511 FARSAQ9Y285 508 aaKnown RBP20.44■□□□□ 0.86
VSX1-206ENST00000444511 UBR5O95071 2799 aaPredicted RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 K7EM74 188 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 BTN3A1O00481 513 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 AP2A1O95782 977 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 GSTM1P09488 218 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 PDHA2P29803 388 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 PRDX3P30048 256 aaKnown RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 PREPP48147 710 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 GDF10P55107 478 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 GSDMDP57764 484 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 FOXK1P85037 733 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 GSTM4Q03013 218 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 GPS2Q13227 327 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 KLF1Q13351 362 aaPredicted RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 IGFBP7Q16270 282 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 DBN1Q16643 649 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 ZNF658BQ4V348 819 aaPredicted RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 COLEC12Q5KU26 742 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 ASB18Q6ZVZ8 466 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 APLFQ8IW19 511 aaPredicted RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 PIANPQ8IYJ0 282 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 TEX19Q8NA77 164 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 OR52E1Q8NGJ3 308 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 SLC35B2Q8TB61 432 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 THAP4Q8WY91 577 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 TFGQ92734 400 aaPredicted RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 CLIP3Q96DZ5 547 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 HGH1Q9BTY7 390 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 TFB2MQ9H5Q4 396 aaKnown RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 SYTL2Q9HCH5 934 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 SMARCAL1Q9NZC9 954 aa20.43■□□□□ 0.86
VSX1-206ENST00000444511 R3HDM2Q9Y2K5 976 aaKnown RBP20.43■□□□□ 0.86
VSX1-206ENST00000444511 CCDC78A2IDD5 438 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 BTN3A3O00478 584 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 AP2A2O94973 939 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 PRKG2Q13237 762 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 SEMA5AQ13591 1074 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 AMIGO1Q86WK6 493 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 SLC38A9Q8NBW4 561 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 LRFN5Q96NI6 719 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 DESI2Q9BSY9 194 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 CHST8Q9H2A9 424 aa20.42■□□□□ 0.86
VSX1-206ENST00000444511 C2orf74A8MZ97 194 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 TMEM150CB9EJG8 249 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 MEN1O00255 615 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 QSOX1O00391 747 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 DNAJB5O75953 348 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 ST6GAL1P15907 406 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 CYP2A7P20853 494 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 MSNP26038 577 aaKnown RBP20.41■□□□□ 0.86
VSX1-206ENST00000444511 NSG1P42857 185 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 ABRQ12979 859 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 BOP1Q14137 746 aaKnown RBP20.41■□□□□ 0.86
VSX1-206ENST00000444511 PRAMEF17Q5VTA0 474 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 IZUMO3Q5VZ72 239 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 ZNF517Q6ZMY9 492 aaPredicted RBP20.41■□□□□ 0.86
VSX1-206ENST00000444511 LINC00523Q86TU6 105 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 NRTNQ99748 197 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 PITPNM3Q9BZ71 974 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 XKR8Q9H6D3 395 aa20.41■□□□□ 0.86
VSX1-206ENST00000444511 TCRBV7S2A1N4TA0A589 114 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 MROH6A6NGR9 719 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 LIN7AO14910 233 aaPredicted RBP20.4■□□□□ 0.86
VSX1-206ENST00000444511 GAS8O95995 478 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 FTH1P02794 183 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 LMAN1P49257 510 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 IL10RAQ13651 578 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 ITIH4Q14624 930 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 PLEKHS1Q5SXH7 462 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 HOOK3Q86VS8 718 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 TMEM139Q8IV31 216 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 DSELQ8IZU8 1212 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 DNAAF3Q8N9W5 541 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 OR1L3Q8NH93 324 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 ELMO1Q92556 727 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 TRIM55Q9BYV6 548 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 SLC7A5P2Q9GIP4 190 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 ACTR5Q9H9F9 607 aaPredicted RBP20.4■□□□□ 0.86
VSX1-206ENST00000444511 SERTAD3Q9UJW9 196 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 SNX7Q9UNH6 387 aa20.4■□□□□ 0.86
VSX1-206ENST00000444511 A0A0U1RQJ8 604 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 ARGFXA6NJG6 315 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 MSL3P1P0C860 447 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms