RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CPED1A4D0V7 1026 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 SLC15A5A6NIM6 579 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 H7C0S8 307 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 MAP2K7O14733 419 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 SMAD9O15198 467 aaKnown RBP5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 ASAP2O43150 1006 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 SPRY3O43610 288 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 KCNK5O95279 499 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 GH2P01242 217 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 ABCB1P08183 1280 aaPredicted RBP5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 TMEM191BP0C7N4 346 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 PSG1P11464 419 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 CYBAP13498 195 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 LIG4P49917 911 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 NUDT6P53370 316 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 GSTO1P78417 241 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 GRB14Q14449 540 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 FOXRED2Q8IWF2 684 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 OR1J2Q8NGS2 313 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 DUSP19Q8WTR2 217 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 APBB2Q92870 758 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 BADQ92934 168 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 PGAP3Q96FM1 320 aaPredicted RBP5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 GRAMD2BQ96HH9 432 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 C12orf42Q96LP6 360 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 ZMAT2Q96NC0 199 aaKnown RBP5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 DGAT2Q96PD7 388 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 RABEP2Q9H5N1 569 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 MAGIXQ9H6Y5 334 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 WDR26Q9H7D7 661 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 UBA2Q9UBT2 640 aaPredicted RBP5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 ACSL5Q9ULC5 683 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 INSL5Q9Y5Q6 135 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 BDP1A6H8Y1 2624 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 A0A1B0GVT2 93 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 A6NL46 340 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 B4DGG1 531 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 DNM1LO00429 736 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 SOCS2O14508 198 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 PPEF2O14830 753 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 TNFRSF13BO14836 293 aaPredicted RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 PLRG1O43660 514 aaKnown RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 STX2P32856 288 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 CAPZA2P47755 286 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 RFX2P48378 723 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 MXI1P50539 228 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 PLCD1P51178 756 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 C21orf58P58505 322 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 CSNK2A1P68400 391 aaPredicted RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 POU5F1Q01860 360 aaKnown RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 SPOCK1Q08629 439 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 GPS2Q13227 327 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 PSMD6Q15008 389 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 MFSD14CQ5VZR4 134 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 TYW3Q6IPR3 259 aaKnown RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 SLC36A4Q6YBV0 504 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 PLPPR4Q7Z2D5 763 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 BEST3Q8N1M1 668 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 NEXN-AS1Q8NBZ9 246 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 MCUQ8NE86 351 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 CSNK2A3Q8NEV1 391 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 HM13Q8TCT9 377 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 PTPMT1Q8WUK0 201 aaPredicted RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 OIT3Q8WWZ8 545 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 RND1Q92730 232 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 ORAI1Q96D31 301 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 KXD1Q9BQD3 176 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 MOV10L1Q9BXT6 1211 aaKnown RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 FAM234AQ9H0X4 552 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 ELOVL5Q9NYP7 299 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 DNAJB4Q9UDY4 337 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 STK39Q9UEW8 545 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 TINAGQ9UJW2 476 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 ZHX1Q9UKY1 873 aaPredicted RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 FZD10Q9ULW2 581 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 ALPK3Q96L96 1907 aa5.54□□□□□ -1.52
RNU4-39P-201ENST00000362455 A0A1W2PRQ8 180 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 INAFM1C9JVW0 142 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 NDUFS7O75251 213 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 PSMD10O75832 226 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 TPOP07202 933 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 GABPAQ06546 454 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 C9orf152Q5JTZ5 239 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 NSUN5P2Q63ZY6 315 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 DUS1LQ6P1R4 473 aaKnown RBP5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 KCTD18Q6PI47 426 aaPredicted RBP5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 CCDC190Q86UF4 302 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 PIM3Q86V86 326 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 ZBTB8BQ8NAP8 495 aaPredicted RBP5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 RHBDF1Q96CC6 855 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 TXNDC15Q96J42 360 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 MMTAG2Q9BU76 263 aaKnown RBP5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 SPRY4Q9C004 299 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 C17orf75Q9HAS0 396 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 ZNF148Q9UQR1 794 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 PTGDR2Q9Y5Y4 395 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 SQORQ9Y6N5 450 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 PLXNB2O15031 1838 aa5.53□□□□□ -1.52
RNU4-39P-201ENST00000362455 DOCK3Q8IZD9 2030 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms