RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GPC4O75487 556 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 CIB2O75838 187 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 APOA4P06727 396 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 RBP1P09455 135 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 CHI3L2Q15782 390 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 BCL7AQ4VC05 210 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 RHEBL1Q8TAI7 183 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 RDH11Q8TC12 318 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 BMFQ96LC9 184 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 TSNARE1Q96NA8 513 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 CENPKQ9BS16 269 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 ACSS2Q9NR19 701 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 ARL8BQ9NVJ2 186 aa14.41□□□□□ -0.1
CXCL12-201ENST00000343575 TSR3Q9UJK0 312 aaKnown RBP14.41□□□□□ -0.1
CXCL12-201ENST00000343575 H0Y8X5 98 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 BTN3A1O00481 513 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 HK3P52790 923 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 CLDN2P57739 230 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 BST1Q10588 318 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 DNAL1Q4LDG9 190 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 KLC3Q6P597 504 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 ORAI3Q9BRQ5 295 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 WDR26Q9H7D7 661 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 ADAMTS6Q9UKP5 1117 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 PRKAB1Q9Y478 270 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 USP34Q70CQ2 3546 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 GON4LQ3T8J9 2241 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 SLC5A10A0PJK1 596 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 A8MT66 165 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 VEGFDO43915 354 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 KRT36O76013 467 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 SLCO2B1O94956 709 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 APBB3O95704 486 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 MYL2P10916 166 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 DGKAP23743 735 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 CD6P30203 668 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 PGM1P36871 562 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 SESN3P58005 492 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 ATP6V0D1P61421 351 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 SIGLEC14Q08ET2 396 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 HSPA14Q0VDF9 509 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 PPP1R3AQ16821 1122 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 TPRG1LQ5T0D9 272 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 SBSNQ6UWP8 590 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 ARHGAP22Q7Z5H3 698 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 TMEM145Q8NBT3 493 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 NRG4Q8WWG1 115 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 FOXJ1Q92949 421 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 BIRC7Q96CA5 298 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 LINC00615Q96LM1 132 aaPredicted RBP14.4□□□□□ -0.1
CXCL12-201ENST00000343575 CCM2Q9BSQ5 444 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 APOOQ9BUR5 198 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 GPR174Q9BXC1 333 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 SLCO1B1Q9Y6L6 691 aa14.4□□□□□ -0.1
CXCL12-201ENST00000343575 QSOX1O00391 747 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 ITM2AO43736 263 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 NUAK1O60285 661 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 KERAO60938 352 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 SNNO75324 88 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-201ENST00000343575 FTH1P02794 183 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 MYCLP1P12525 358 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-201ENST00000343575 KPNA2P52292 529 aaKnown RBP14.39□□□□□ -0.11
CXCL12-201ENST00000343575 POLE2P56282 527 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 AP2B1P63010 937 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 BOP1Q14137 746 aaKnown RBP14.39□□□□□ -0.11
CXCL12-201ENST00000343575 RNF220Q5VTB9 566 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 KIAA0895LQ68EN5 471 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 DOK6Q6PKX4 331 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 MAMSTRQ6ZN01 415 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 RASGRP3Q8IV61 690 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 CAMKK1Q8N5S9 505 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 ELMO1Q92556 727 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 EDAQ92838 391 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 GATA5Q9BWX5 397 aaPredicted RBP14.39□□□□□ -0.11
CXCL12-201ENST00000343575 C1QTNF7Q9BXJ2 289 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 TMEM120AQ9BXJ8 343 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 TM7SF3Q9NS93 570 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 KCNK4Q9NYG8 393 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 TAS2R1Q9NYW7 299 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 NDUFA13Q9P0J0 144 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 SLC23A2Q9UGH3 650 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 GPR34Q9UPC5 381 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 EML5Q05BV3 1969 aa14.39□□□□□ -0.11
CXCL12-201ENST00000343575 A0A0C4DFX4 3053 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 A0A0G2JND7 137 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 UBXN8O00124 270 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 TRIM13O60858 407 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 FKBP6O75344 327 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 ZNF217O75362 1048 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CEACAM5P06731 702 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CBSLP0DN79 551 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 HNRNPA2B1P22626 353 aaKnown RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PDHA2P29803 388 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 OXTRP30559 389 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CBSP35520 551 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CXCL12P48061 93 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 CCR5P51681 352 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PHKG1Q16816 387 aa14.38□□□□□ -0.11
CXCL12-201ENST00000343575 PLEKHS1Q5SXH7 462 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms