RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SRFP11831 508 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 NQO1P15559 274 aaKnown RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 ADPRHP54922 357 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 CDK3Q00526 305 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 SFSWAPQ12872 951 aaKnown RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 CDC16Q13042 620 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 ZNF658BQ4V348 819 aaPredicted RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 USP30Q70CQ3 517 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 RASGRP3Q8IV61 690 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 MCOLN3Q8TDD5 553 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 KCNA7Q96RP8 456 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 NOL11Q9H8H0 719 aaKnown RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 ZNF225Q9UK10 706 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 C17orf113A0A1B0GUU1 675 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 K7EPI3 171 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 CCNT2O60583 730 aaKnown RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 PSIP1O75475 530 aaKnown RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 CHEK2O96017 543 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 OTCP00480 354 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 ZNF8P17098 575 aaPredicted RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 PBLDP30039 288 aaPredicted RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 PRDX3P30048 256 aaKnown RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 ADSLP30566 484 aaPredicted RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 GGT5P36269 586 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 PIK3CGP48736 1102 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 KCNJ2P63252 427 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 LEXMQ3ZCV2 418 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 MBOAT1Q6ZNC8 495 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 SLC22A15Q8IZD6 547 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 CPSF7Q8N684 471 aaKnown RBP17.75■□□□□ 0.43
VIM-201ENST00000224237 DEFB123Q8N688 67 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 TEX9Q8N6V9 391 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 OR52B6Q8NGF0 335 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 CMTM5Q96DZ9 223 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 ZNF385DQ9H6B1 395 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 PREBQ9HCU5 417 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 SLC40A1Q9NP59 571 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 GULP1Q9UBP9 304 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 NCKAP1Q9Y2A7 1128 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 ANGPTL3Q9Y5C1 460 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 DOCK9Q9BZ29 2069 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 STK16O75716 305 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 ACADMP11310 421 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 PRDX6P30041 224 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 PREPP48147 710 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 CCR3P51677 355 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 PLOD1Q02809 727 aaPredicted RBP17.74■□□□□ 0.43
VIM-201ENST00000224237 SGCGQ13326 291 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 TDGQ13569 410 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 IRF4Q15306 451 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 MAP7D1Q3KQU3 841 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 TMEM259Q4ZIN3 620 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 SLC44A4Q53GD3 710 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 CHCHD4Q8N4Q1 142 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 TP53I13Q8NBR0 393 aaPredicted RBP17.74■□□□□ 0.43
VIM-201ENST00000224237 ATP6V1E2Q96A05 226 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 FOPNLQ96NB1 174 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 RAB3IPQ96QF0 476 aaPredicted RBP17.74■□□□□ 0.43
VIM-201ENST00000224237 BTBD10Q9BSF8 475 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 C1QTNF7Q9BXJ2 289 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 C1QTNF2Q9BXJ5 285 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 IPPKQ9H8X2 491 aa17.74■□□□□ 0.43
VIM-201ENST00000224237 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.74■□□□□ 0.432e-33■■□□□ 11.5
VIM-201ENST00000224237 NDRG2Q9UN36 371 aaKnown RBP17.74■□□□□ 0.43
VIM-201ENST00000224237 A0A1W2PQU0 124 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 H3BM21 787 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 OR7A17O14581 309 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 PIP5K1BO14986 540 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 PAK4O96013 591 aaPredicted RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 MAP4P27816 1152 aaKnown RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 ARL1P40616 181 aaPredicted RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 MNAT1P51948 309 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 CCNG1P51959 295 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 KLF10Q13118 480 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 FGL2Q14314 439 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 TMEM198Q66K66 360 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 NEK5Q6P3R8 708 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 ZNF547Q8IVP9 402 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 DDIASQ8IXT1 998 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 LILRA3Q8N6C8 439 aaPredicted RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 MRGPRX1Q96LB2 322 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 CATSPER2Q96P56 530 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 CCT7Q99832 543 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 TEX101Q9BY14 249 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 PFDN4Q9NQP4 134 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 MBNL1Q9NR56 388 aaKnown RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 KLC4Q9NSK0 619 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 MMP17Q9ULZ9 603 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 PRR23AA6NEV1 266 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 GPR89AB7ZAQ6 455 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 CHUKO15111 745 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 RNGTTO60942 597 aaKnown RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 KATNA1O75449 491 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 OR4F21O95013 312 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 CATP04040 527 aaKnown RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 GPR89BP0CG08 455 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 EPB42P16452 691 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 HNRNPH1P31943 449 aaKnown RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 TRIM23P36406 574 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms