RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 FDFT1P37268 417 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 CDC20Q12834 499 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 PRKAA1Q13131 559 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 TUBB3Q13509 450 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 SEPT6Q14141 434 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 POU6F1Q14863 301 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 TAS2R42Q7RTR8 314 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 SERPINA9Q86WD7 417 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 UNC5BQ8IZJ1 945 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 D2HGDHQ8N465 521 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 GALNT6Q8NCL4 622 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 SPDYE1Q8NFV5 336 aaPredicted RBP18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 STARD8Q92502 1023 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 COG4Q9H9E3 785 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 IL17BQ9UHF5 180 aa18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 FLNBO75369 2602 aaKnown RBP18.59■□□□□ 0.57
CCDC28A-203ENST00000617445 A0A0U1RQJ8 604 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 OR6C74A6NCV1 312 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 SLC28A2O43868 658 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 DLSTP36957 453 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 NSG1P42857 185 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 POLE2P56282 527 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 PPP1CAP62136 330 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 CDH17Q12864 832 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 ITIH4Q14624 930 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 TMTC4Q5T4D3 741 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 ELMO2Q96JJ3 720 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 MVB12BQ9H7P6 319 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 FGF21Q9NSA1 209 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 FAM8A1Q9UBU6 413 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 LNPEPQ9UIQ6 1025 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 RIMKLBQ9ULI2 386 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 GUCA1BQ9UMX6 200 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 SEC16AO15027 2179 aa18.58■□□□□ 0.56
CCDC28A-203ENST00000617445 F8W8V4 182 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 CCL22O00626 93 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 LIASO43766 372 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 SUN1O94901 812 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 FOLR1P15328 257 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 CDKN1CP49918 316 aaPredicted RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 TUBB4BP68371 445 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 KCNAB2Q13303 367 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 TUBB2AQ13885 445 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 OASLQ15646 514 aaKnown RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 ZNF658BQ4V348 819 aaPredicted RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 LYPLAL1Q5VWZ2 237 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 DUS1LQ6P1R4 473 aaKnown RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 SLC13A5Q86YT5 568 aaPredicted RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 LILRA3Q8N6C8 439 aaPredicted RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 DNAAF3Q8N9W5 541 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 APOBEC4Q8WW27 367 aaKnown RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 LCN9Q8WX39 176 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 FERD3LQ96RJ6 166 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 TTC1Q99614 292 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 TUBB2BQ9BVA1 445 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 OR52A5Q9H2C5 316 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 SRMSQ9H3Y6 488 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 TFB2MQ9H5Q4 396 aaKnown RBP18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 SYTL2Q9HCH5 934 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 C1GALT1Q9NS00 363 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 CROTQ9UKG9 612 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 ZNF148Q9UQR1 794 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 PCDHGA6Q9Y5G7 932 aa18.57■□□□□ 0.56
CCDC28A-203ENST00000617445 HEATR9A2RTY3 570 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 C21orf140B9A014 251 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 TERTO14746 1132 aaKnown RBP18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 LIN7AO14910 233 aaPredicted RBP18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 ARHGAP6O43182 974 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 MAP3K7O43318 606 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 PRKAR1AP10644 381 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 MSNP26038 577 aaKnown RBP18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 PLOD1Q02809 727 aaPredicted RBP18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 PACS1Q6VY07 963 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 ATG14Q6ZNE5 492 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 NLRP9Q7RTR0 991 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 PRICKLE2Q7Z3G6 844 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 OR4E2Q8NGC2 313 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 NAT14Q8WUY8 206 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 ATG4AQ8WYN0 398 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 SEC14L1Q92503 715 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 PEX13Q92968 403 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 ETNK1Q9HBU6 452 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 LHX9Q9NQ69 397 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 LATS2Q9NRM7 1088 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 SMARCAL1Q9NZC9 954 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 POMT2Q9UKY4 750 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 BTRCQ9Y297 605 aa18.56■□□□□ 0.56
CCDC28A-203ENST00000617445 E7EVH7 732 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 FTH1P02794 183 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 EBLN1P0CF75 366 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 OAS2P29728 719 aaKnown RBP18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 LMAN1P49257 510 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 KPNA2P52292 529 aaKnown RBP18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 KCNAB1Q14722 419 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 RPS6KA1Q15418 735 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 DBN1Q16643 649 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 PWWP2BQ6NUJ5 590 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 CERS6Q6ZMG9 384 aa18.55■□□□□ 0.56
CCDC28A-203ENST00000617445 PPP1R21Q6ZMI0 780 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms