RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CABIN1Q9Y6J0 2220 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 PRSS38A1L453 326 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 SYCE1LA8MT33 242 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 TCP11X1B4DZS4 312 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 LAMTOR5O43504 91 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 PSIP1O75475 530 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 SERPINE1P05121 402 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 C8GP07360 202 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 TPBGLP0DKB5 382 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 PDHA2P29803 388 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 BST1Q10588 318 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 SP140Q13342 867 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 NFE2L1Q14494 772 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 PLA2G4EQ3MJ16 856 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 LIPMQ5VYY2 423 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 LONP2Q86WA8 852 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 GPSM1Q86YR5 675 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 GALNT13Q8IUC8 556 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 C1orf210Q8IVY1 113 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 CFAP206Q8IYR0 622 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 SLC22A18ASQ8N1D0 253 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 CHMP6Q96FZ7 201 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 SLC6A18Q96N87 628 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 SLC12A9Q9BXP2 914 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 DPEP2Q9H4A9 486 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 MRPL40Q9NQ50 206 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 ZNHIT2Q9UHR6 403 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 TSR3Q9UJK0 312 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 PNMA8BQ9ULN7 279 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 ZNF318Q5VUA4 2279 aa14.43□□□□□ -0.1
SHKBP1-211ENST00000595945 GMNCA6NCL1 334 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 SMIM24O75264 130 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 SNNO75324 88 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 H2AFYO75367 372 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 IPO13O94829 963 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 WNT1P04628 370 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ENO2P09104 434 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 DRD4P21917 467 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 GRK2P25098 689 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 HTR1BP28222 390 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ACADLP28330 430 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 CLCNKAP51800 687 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 THOP1P52888 689 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 SEC24CP53992 1094 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 CDKL1Q00532 357 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 OCRLQ01968 901 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ASPHQ12797 758 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 TGFBIQ15582 683 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 PHKG1Q16816 387 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ALG11Q2TAA5 492 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 CDKL4Q5MAI5 379 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 METRNLQ641Q3 311 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ATG16L1Q676U5 607 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ENPP7Q6UWV6 458 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ATG14Q6ZNE5 492 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 ZCCHC23Q6ZST2 131 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 IQCHQ86VS3 1027 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 SLC22A9Q8IVM8 553 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 LRRC34Q8IZ02 419 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 DEFB119Q8N690 84 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 DTWD2Q8NBA8 298 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 PDPRQ8NCN5 879 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 DNASE2BQ8WZ79 361 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 SNX19Q92543 992 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 NELL1Q92832 810 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 L3HYPDHQ96EM0 354 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 PDXPQ96GD0 296 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 OR2M4Q96R27 311 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 EPN3Q9H201 632 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 NCKIPSDQ9NZQ3 722 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 FAM8A1Q9UBU6 413 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 KLQ9UEF7 1012 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 EIF2B4Q9UI10 523 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 PDE10AQ9Y233 779 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 DGKBQ9Y6T7 804 aa14.42□□□□□ -0.1
SHKBP1-211ENST00000595945 SPTY2D1-AS1A0A0U1RR47 76 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 MEI4A8MW99 385 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 TMEM114B3SHH9 223 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 SUPT3HB4E1H0 165 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 H3BM21 787 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 STX16-NPEPL1H3BU86 382 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 STX16O14662 325 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 EDF1O60869 148 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 SUPT3HO75486 399 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 THEGLP0DJG4 465 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 ACP5P13686 325 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 IMPDH1P20839 514 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 ARRB2P32121 409 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 MAPK9P45984 424 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 GNPDA1P46926 289 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 SRP54P61011 504 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 CSTF1Q05048 431 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 EIF2B5Q13144 721 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 STX3Q13277 289 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 PTK2BQ14289 1009 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 FZD2Q14332 565 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 UBE2R2Q712K3 238 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 PDZD3Q86UT5 571 aa14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 DCP2Q8IU60 420 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-211ENST00000595945 FBXO39Q8N4B4 442 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms