RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ABCG1P45844 678 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 LEPRP48357 1165 aaKnown RBP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 CSE1LP55060 971 aaKnown RBP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 PPP1CAP62136 330 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 RPA4Q13156 261 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 KIAA0930Q6ICG6 404 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 IRGCQ6NXR0 463 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 SYT10Q6XYQ8 523 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 LRRC69Q6ZNQ3 347 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 FAM92BQ6ZTR7 304 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 PDZD3Q86UT5 571 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 KRT222Q8N1A0 295 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 AGGF1Q8N302 714 aaeCLIP11.54□□□□□ -0.56
RAB5C-204ENST00000547517 KCNE4Q8WWG9 221 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 USP7Q93009 1102 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 PMEPA1Q969W9 287 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 C9orf72Q96LT7 481 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 FERD3LQ96RJ6 166 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 TRIM51Q9BSJ1 452 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 HGH1Q9BTY7 390 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 TSSK1BQ9BXA7 367 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 KIR3DX1Q9H7L2 352 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 FOXJ2Q9P0K8 574 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 PDP2Q9P2J9 529 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 SLC24A2Q9UI40 661 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 PCDHGA7Q9Y5G6 932 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 HEBP2Q9Y5Z4 205 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 COLEC10Q9Y6Z7 277 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 LAMA5O15230 3695 aa11.54□□□□□ -0.56
RAB5C-204ENST00000547517 FAM237BA0A1B0GVD1 139 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 C9orf172C9J069 976 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 CCDC188H7C350 402 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 PRMT5O14744 637 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 TTI1O43156 1089 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 NDUFS3O75489 264 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 C9P02748 559 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 FGF3P11487 239 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 NDUFS1P28331 727 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ARCN1P48444 511 aaKnown RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 EIF3BP55884 814 aaKnown RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ETF1P62495 437 aaKnown RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 DHX34Q14147 1143 aaKnown RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 COL28A1Q2UY09 1125 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ANKRD20A4Q4UJ75 823 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ARMC3Q5W041 872 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 MRNIPQ6NTE8 343 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 KLHL35Q6PF15 583 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 SYDE1Q6ZW31 735 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ARHGAP22Q7Z5H3 698 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 OOSP2Q86WS3 158 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 SPACA3Q8IXA5 215 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ART4Q93070 314 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 FCRL3Q96P31 734 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 KRT12Q99456 494 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 OCIAD1Q9NX40 245 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 RNF14Q9UBS8 474 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 GNPTGQ9UJJ9 305 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 RPS6KL1Q9Y6S9 549 aa11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ANKRD11Q6UB99 2663 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-204ENST00000547517 ZFHX4Q86UP3 3567 aa11.52□□□□□ -0.56
RAB5C-204ENST00000547517 PIKFYVEQ9Y2I7 2098 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 SLC5A10A0PJK1 596 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 OR5K3A6NET4 321 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 KLK10O43240 276 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 BANF1O75531 89 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 F7P08709 466 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 ANKRD34CP0C6C1 535 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 OGNP20774 298 aaKnown RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 CCR7P32248 378 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 CD151P48509 253 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 SEPHS1P49903 392 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 C2orf54Q08AI8 447 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 TMED2Q15363 201 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 TYSND1Q2T9J0 566 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 RNF187Q5TA31 235 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 TMEM164Q5U3C3 297 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 ZNF470Q6ECI4 717 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 PRSS42Q7Z5A4 293 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 PCGF5Q86SE9 256 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 SDCCAG8Q86SQ7 713 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 HOOK3Q86VS8 718 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 PHC3Q8NDX5 983 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 ACVR1CQ8NER5 493 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 TFGQ92734 400 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 STAMBPL1Q96FJ0 436 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 ZDHHC12Q96GR4 267 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 CRELD1Q96HD1 420 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 C16orf45Q96MC5 204 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 TRIM31Q9BZY9 425 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 P2RY12Q9H244 342 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 MVB12BQ9H7P6 319 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 SLC39A1Q9NY26 324 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
RAB5C-204ENST00000547517 ASF1AQ9Y294 204 aa11.52□□□□□ -0.57
RAB5C-204ENST00000547517 CFAP47Q6ZTR5 3102 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms