RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TEX26Q8N6G2 289 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 ARRDC4Q8NCT1 418 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 OR4L1Q8NH43 312 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 MCFD2Q8NI22 146 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 FAM162AQ96A26 154 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 ACTL8Q9H568 366 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 NOL6Q9H6R4 1146 aaKnown RBP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 UXTQ9UBK9 157 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-205ENST00000539661 NOX1Q9Y5S8 564 aa17.33■□□□□ 0.36
RAB40C-205ENST00000539661 SMIM35A0A1B0GVV1 85 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 ILVBLA1L0T0 632 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 CXCR6O00574 342 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 PTGESO14684 152 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 ANKRD28O15084 1053 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 ALDH4A1P30038 563 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 UGT2B10P36537 528 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 CYP4F3Q08477 520 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 LAPTM5Q13571 262 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 ANKRD34AQ69YU3 496 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 CAPN13Q6MZZ7 669 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-205ENST00000539661 GABARAPL1Q9H0R8 117 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 AGO3Q9H9G7 860 aaKnown RBP17.32■□□□□ 0.36
RAB40C-205ENST00000539661 ABCC13Q9NSE7 274 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 DCAF13Q9NV06 445 aaKnown RBP17.32■□□□□ 0.36
RAB40C-205ENST00000539661 A3GALT2U3KPV4 340 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 MAN1A2O60476 641 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 G6PDP11413 515 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 TCEA1P23193 301 aaKnown RBP17.32■□□□□ 0.36
RAB40C-205ENST00000539661 PSMB9P28065 219 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 PCSK1P29120 753 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 MAP2K4P45985 399 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 NRIP1P48552 1158 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 KRR1Q13601 381 aaKnown RBP17.32■□□□□ 0.36
RAB40C-205ENST00000539661 TMEM179BQ7Z7N9 219 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 GPR149Q86SP6 731 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 CHCHD4Q8N4Q1 142 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 TBC1D20Q96BZ9 403 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 VAPAQ9P0L0 249 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 GALPQ9UBC7 116 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 IKZF3Q9UKT9 509 aa17.32■□□□□ 0.36
RAB40C-205ENST00000539661 GBF1Q92538 1859 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 ANKRD12Q6UB98 2062 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 OR4F21O95013 312 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 FGF1P05230 155 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 HLA-DPA1P20036 260 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 SLC10A7Q0GE19 358 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 IHHQ14623 411 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 KIAA0040Q15053 153 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 SETMARQ53H47 684 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-205ENST00000539661 VARS2Q5ST30 1063 aaKnown RBP17.31■□□□□ 0.36
RAB40C-205ENST00000539661 LRRC8DQ7L1W4 858 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 ZHX1-C8orf76Q96EF9 292 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 ACOT13Q9NPJ3 140 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 EXD2Q9NVH0 621 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 MPP6Q9NZW5 540 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 PSMD11O00231 422 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 CDC7O00311 574 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 RGS10O43665 173 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 DFNA5O60443 496 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 MASP1P48740 699 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 AGTR2P50052 363 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 SLC13A2Q13183 592 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 SHQ1Q6PI26 577 aaKnown RBP17.31■□□□□ 0.36
RAB40C-205ENST00000539661 OR10A6Q8NH74 314 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 ARRDC2Q8TBH0 407 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 SLC13A3Q8WWT9 602 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 MYLPFQ96A32 169 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 CDCA5Q96FF9 252 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 C1orf74Q96LT6 269 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 ABCB10Q9NRK6 738 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 PCDHB14Q9Y5E9 798 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 HS3ST4Q9Y661 456 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 OTOFQ9HC10 1997 aa17.31■□□□□ 0.36
RAB40C-205ENST00000539661 FTH1P02794 183 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 MMP3P08254 477 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 PRKACGP22612 351 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 FSHRP23945 695 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 IGFBP5P24593 272 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 NEK2P51955 445 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 DGKQP52824 942 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 FCGRTP55899 365 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 PON2Q15165 354 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 TRIP4Q15650 581 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 ZNF404Q494X3 552 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 HABP4Q5JVS0 413 aaKnown RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 MSANTD2Q6P1R3 559 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 AGMOQ6ZNB7 445 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 CDYL2Q8N8U2 506 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 BRSK1Q8TDC3 778 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 HTRA1Q92743 480 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 ZBTB18Q99592 522 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 THUMPD3Q9BV44 507 aaKnown RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 MED16Q9Y2X0 877 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 NPEPPSL1A6NEC2 478 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 E2F3O00716 465 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 RECQL5O94762 991 aaPredicted RBP17.3■□□□□ 0.36
RAB40C-205ENST00000539661 MT-ND2P03891 347 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 AKT1P31749 480 aa17.3■□□□□ 0.36
RAB40C-205ENST00000539661 SCNN1GP51170 649 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms