RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 MCEMP1Q8IX19 187 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 PALM2Q8IXS6 379 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SCML4Q8N228 414 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 DPP10Q8N608 796 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 CXorf38Q8TB03 319 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 C8orf49Q96NF6 230 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SPAG5Q96R06 1193 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 FCRL5Q96RD9 977 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SEPT5Q99719 369 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 HEMGNQ9BXL5 484 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 FTHL17Q9BXU8 183 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 PLEKHA4Q9H4M7 779 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 PDZD7Q9H5P4 517 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 POLR1BQ9H9Y6 1135 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 KIF9Q9HAQ2 790 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLC38A10Q9HBR0 1119 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SYBUQ9NX95 663 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLC17A6Q9P2U8 582 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 MAU2Q9Y6X3 613 aa4.75□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCDC168Q8NDH2 2452 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 CELSR2Q9HCU4 2923 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 MED13Q9UHV7 2174 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 DOCK6Q96HP0 2047 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 TCRBV5S1A1TA0A578 114 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 TCRBV21S2A2A0A5A6 115 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 TYW5A2RUC4 315 aaKnown RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 TMCC1O94876 653 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 GGPS1O95749 300 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 CHRNA1P02708 482 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 HNRNPCP07910 306 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 SMIM10L2AP0DMW4 78 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 SMIM10L2BP0DMW5 78 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 WT1P19544 449 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 CALML3P27482 149 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 PPP2R1AP30153 589 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 HOXC13P31276 330 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 IDUAP35475 653 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 DHPSP49366 369 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 METAP2P50579 478 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZNF41P51814 821 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 PNLIPRP2P54317 469 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 F2RL1P55085 397 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 TMPRSS3P57727 454 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZBTB16Q05516 673 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 BFSP1Q12934 665 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 GIT2Q14161 759 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 FGFBP1Q14512 234 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZNF169Q14929 603 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 CDC37Q16543 378 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 MAPK6Q16659 721 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ME3Q16798 604 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 USP41Q3LFD5 358 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 FBXO43Q4G163 708 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 FBLN7Q53RD9 439 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ADALQ6DHV7 355 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 SUMO4Q6EEV6 95 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 AAGABQ6PD74 315 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 Q6ZS52 159 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 SEPT14Q6ZU15 432 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 CCAR2Q8N163 923 aaKnown RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ZCCHC9Q8N567 271 aaKnown RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 C8orf58Q8NAV2 365 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 RNF183Q96D59 192 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 NXPE2Q96DL1 559 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 PGAP3Q96FM1 320 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 CAMK1GQ96NX5 476 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 WDFY2Q96P53 400 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 GBP5Q96PP8 586 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLITRK1Q96PX8 696 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 GCNAQ96QF7 691 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 TIMP4Q99727 224 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 GATA5Q9BWX5 397 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 RANGRFQ9HD47 186 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 BPIFA1Q9NP55 256 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ARHGEF38Q9NXL2 777 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ABI3Q9P2A4 366 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 NLKQ9UBE8 527 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 AMACRQ9UHK6 382 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 ANAPC5Q9UJX4 755 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 NENFQ9UMX5 172 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 SLC4A4Q9Y6R1 1079 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 STAB1Q9NY15 2570 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 WDR81Q562E7 1941 aa4.74□□□□□ -1.65
HMGB1P23-201ENST00000518743 DENND3A2RUS2 1198 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 OR2A25A4D2G3 310 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 CBY3A6NI87 242 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 A6NL46 340 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 HAS3O00219 553 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 TLX3O43711 291 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 MITFO75030 526 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 AVILO75366 819 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 RFPL2O75678 378 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 AKAP3O75969 853 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 PAPSS2O95340 614 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 HIST1H2ABP04908 130 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 MYZAPP0CAP1 466 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 HSPA5P11021 654 aaKnown RBP4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 HIST1H2ADP20671 130 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 BMP5P22003 454 aa4.73□□□□□ -1.65
HMGB1P23-201ENST00000518743 PON1P27169 355 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms