RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 SNPHO15079 494 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 FFAR2O15552 330 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 IDH3BO43837 385 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 DDX5P17844 614 aaKnown RBP11.15□□□□□ -0.63
SMPD4-218ENST00000482171 OGNP20774 298 aaKnown RBP11.15□□□□□ -0.63
SMPD4-218ENST00000482171 PRDX6P30041 224 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 MAT2AP31153 395 aaKnown RBP11.15□□□□□ -0.63
SMPD4-218ENST00000482171 PRKAG1P54619 331 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 TPTEP56180 551 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 ECT2LQ008S8 904 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 GPM6BQ13491 265 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 MYBPC3Q14896 1274 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 PM20D1Q6GTS8 502 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 PAGE2Q7Z2X7 111 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 OR2AP1Q8NGE2 309 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 MOCS1Q9NZB8 636 aa11.15□□□□□ -0.63
SMPD4-218ENST00000482171 MARCH4Q9P2E8 410 aaPredicted RBP11.15□□□□□ -0.63
SMPD4-218ENST00000482171 GPC6Q9Y625 555 aaPredicted RBP11.15□□□□□ -0.63
SMPD4-218ENST00000482171 TCRBV5S1A1TA0A578 114 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 S100A1P23297 94 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 GGT5P36269 586 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 STT3AP46977 705 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 SEC13P55735 322 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 DEFB103AP81534 67 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 CNTN1Q12860 1018 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 CILP2Q8IUL8 1156 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 CANT1Q8WVQ1 401 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 ZNF599Q96NL3 588 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 SLC39A3Q9BRY0 314 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 C11orf84Q9BUA3 381 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 SMPD3Q9NY59 655 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 TUBA8Q9NY65 449 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 BTBD3Q9Y2F9 522 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 NFATC1O95644 943 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 PRSS56P0CW18 603 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 IDO1P14902 403 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 ZNF37AP17032 561 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 GDF5P43026 501 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 TMPRSS11BQ86T26 416 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 SVOPQ8N4V2 548 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 C1orf74Q96LT6 269 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 OR52E6Q96RD3 313 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 GIN1Q9NXP7 522 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 SIRPGQ9P1W8 387 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 AURKAO14965 403 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 SORBS2O94875 1100 aaKnown RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 KCNH1O95259 989 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 CLIC3O95833 236 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 TYRP14679 529 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 RPS9P46781 194 aaKnown RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 RFTN1Q14699 578 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 C2orf27AQ580R0 203 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 CMPK2Q5EBM0 449 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 LYPLAL1Q5VWZ2 237 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 TIFABQ6ZNK6 161 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 TMEM132CQ8N3T6 1108 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 KHSRPQ92945 711 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 C12orf43Q96C57 262 aaKnown RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 IMP4Q96G21 291 aaKnown RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 TRIM45Q9H8W5 580 aaPredicted RBP11.14□□□□□ -0.63
SMPD4-218ENST00000482171 NCKAP1Q9Y2A7 1128 aa11.14□□□□□ -0.63
SMPD4-218ENST00000482171 CLDN25C9JDP6 229 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 LEFTY2O00292 366 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 KPNA5O15131 536 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 OR1I1O60431 355 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 BNIP2Q12982 314 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 CCNIQ14094 377 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 CYP2A13Q16696 494 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 ATAT1Q5SQI0 421 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 TMEM135Q86UB9 458 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 ZNF540Q8NDQ6 660 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 SETD9Q8NE22 299 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 OR9I1Q8NGQ6 314 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 PNPT1Q8TCS8 783 aaKnown RBP11.13□□□□□ -0.63
SMPD4-218ENST00000482171 EEF1AKMT1Q8WVE0 214 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 PPP1R14BQ96C90 147 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 NUAK2Q9H093 628 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 RHBGQ9H310 441 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 ELAC1Q9H777 363 aaKnown RBP11.13□□□□□ -0.63
SMPD4-218ENST00000482171 C3orf18Q9UK00 162 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 KDELR3O43731 214 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 CST1P01037 141 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 HLA-EP13747 358 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 POLD2P49005 469 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 CCDC157Q569K6 752 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 TMEM214Q6NUQ4 689 aaKnown RBP11.13□□□□□ -0.63
SMPD4-218ENST00000482171 TMEM220Q6QAJ8 160 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 GPR180Q86V85 440 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 ANKRD46Q86W74 232 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 ATL1Q8WXF7 558 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 AARSD1Q9BTE6 412 aaKnown RBP11.13□□□□□ -0.63
SMPD4-218ENST00000482171 CCDC106Q9BWC9 280 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 SLCO3A1Q9UIG8 710 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 A0A0J9YVX5 310 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 EI24O14681 340 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 ECI2O75521 394 aa11.13□□□□□ -0.63
SMPD4-218ENST00000482171 PENKP01210 267 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms