RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TMEM53Q6P2H8 277 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 GPSM1Q86YR5 675 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 MSRB3Q8IXL7 192 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 PJA1Q8NG27 643 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 OR4F6Q8NGB9 312 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 CD200R1Q8TD46 325 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 HEBP1Q9NRV9 189 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 VNN3Q9NY84 501 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 SLC25A37Q9NYZ2 338 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 DNAJB9Q9UBS3 223 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 ZMYM5Q9UJ78 669 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 RBMX2Q9Y388 322 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 SNX5Q9Y5X3 404 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 BMP4P12644 408 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 CYP4B1P13584 511 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 RPL9P32969 192 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 RPL38P63173 70 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 OCA2Q04671 838 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 RAPSNQ13702 412 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 KIAA0040Q15053 153 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 INAVAQ3KP66 663 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 GLT6D1Q7Z4J2 308 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 ANKRD13BQ86YJ7 626 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 HPS1Q92902 700 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 FAM162AQ96A26 154 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 RHBDF1Q96CC6 855 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 RMDN1Q96DB5 314 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 TRIB3Q96RU7 358 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 NLE1Q9NVX2 485 aaPredicted RBP11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 ERVK-18Q9QC07 812 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 CHD5Q8TDI0 1954 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 MYADML2A6NDP7 307 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF99A8MXY4 864 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ARVCFO00192 962 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 OR7A17O14581 309 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 B4GALT3O60512 393 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 PARNO95453 639 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 B3GALT4O96024 378 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 CHRNA1P02708 482 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 UGT2B4P06133 528 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 HOXB8P17481 243 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 PBX3P40426 434 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 GABARAPL2P60520 117 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 CYP4F3Q08477 520 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 PAGE2BQ5JRK9 111 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF362Q5T0B9 420 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF691Q5VV52 312 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 PLEKHH3Q7Z736 793 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 KRTCAP2Q8N6L1 136 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 CLHC1Q8NHS4 586 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 FARSBQ9NSD9 589 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 TMEFF2Q9UIK5 374 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 FKBPLQ9UIM3 349 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 IGLV3-10A0A075B6K4 115 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 CCL15-CCL14A0A0B4J2E2 113 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 DYTNA2CJ06 578 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 M0QZQ0 153 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 FFAR3O14843 346 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 GPR182O15218 404 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 GPR42O15529 346 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 FTH1P02794 183 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ITIH1P19827 911 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 CD6P30203 668 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 DCTP40126 519 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 IL5RAQ01344 420 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 DGCR6Q14129 220 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 CCL15Q16663 113 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 FAM174BQ3ZCQ3 159 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 CCDC81Q6ZN84 652 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 GOLGA7Q7Z5G4 137 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 MFSD4AQ8N468 514 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 GTF2H4Q92759 462 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 GLMNQ92990 594 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 NCLNQ969V3 563 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 SLC10A4Q96EP9 437 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF382Q96SR6 550 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 YIPF2Q9BWQ6 316 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 UGT2B28Q9BY64 529 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF408Q9H9D4 720 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 ZFP14Q9HCL3 533 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 HMG20AQ9NP66 347 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 KIAA1522Q9P206 1035 aaPredicted RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 TRMT6Q9UJA5 497 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 GIT1Q9Y2X7 761 aa11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 FAM32AQ9Y421 112 aaKnown RBP11.54□□□□□ -0.56
PDZRN3-203ENST00000462146 A8MU76 341 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ARNTLO00327 626 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CXCR6O00574 342 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 CNOT3O75175 753 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 E2F6O75461 281 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NADKO95544 446 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NPPAP01160 153 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 SERPINF2P08697 491 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GSTT2P0CG29 244 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 GSTT2BP0CG30 244 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF865P0CJ78 1059 aaPredicted RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 PKMP14618 531 aaKnown RBP11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 TGM1P22735 817 aa11.53□□□□□ -0.56
PDZRN3-203ENST00000462146 NCS1P62166 190 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms