RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 HYOU1Q9Y4L1 999 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC88AQ3V6T2 1871 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZMYM6O95789 1325 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 AFF2P51816 1311 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 ALKQ9UM73 1620 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MYH7BA7E2Y1 1941 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 MYH4Q9Y623 1939 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 A0A1B0GVM2 712 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 A0A1W2PQ09 198 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 GMNCA6NCL1 334 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 C5orf60A6NFR6 353 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ASAP2O43150 1006 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SPRY3O43610 288 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 HS6ST1O60243 411 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 E2F6O75461 281 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 DAB1O75553 588 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SURF6O75683 361 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 GJB3O75712 270 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 STARD3NLO95772 234 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 FTCDO95954 541 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PENKP01210 267 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SRPRAP08240 638 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC166P0CW27 439 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 HOXB2P14652 356 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 DDX5P17844 614 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 MAOAP21397 527 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 GCH1P30793 250 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ACSL1P33121 698 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PIGAP37287 484 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 NR4A2P43354 598 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 RFX5P48382 616 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 CLCN3P51790 818 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 NDUFA8P51970 172 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PMS2P54278 862 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 GALCP54803 685 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 TNNC1P63316 161 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 MRPS25P82663 173 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 KLC1Q07866 573 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ACSM2AQ08AH3 577 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PRPF4BQ13523 1007 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 CTTNQ14247 550 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 HNF4GQ14541 408 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 RRS1Q15050 365 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 NECTIN1Q15223 517 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PCGF3Q3KNV8 242 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 CDONQ4KMG0 1287 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 FSCBQ5H9T9 825 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 FNBP1LQ5T0N5 605 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 C1QTNF12Q5T7M4 302 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 AGBL2Q5U5Z8 902 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ACSM2BQ68CK6 577 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ANKRD54Q6NXT1 300 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 METTL2BQ6P1Q9 378 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 FAM173BQ6P4H8 233 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC80Q76M96 950 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SHFQ7M4L6 423 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 AADATQ8N5Z0 425 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 EIF1ADQ8N9N8 165 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 NOA1Q8NC60 698 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 TEKT4Q8WW24 435 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 IGSF8Q969P0 613 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZNF653Q96CK0 615 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 HMCESQ96FZ2 354 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 RBM41Q96IZ5 413 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 METTL2AQ96IZ6 378 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 C8orf76Q96K31 380 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCT8L2Q96SF2 557 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 IWS1Q96ST2 819 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 CENPKQ9BS16 269 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SIGLEC1Q9BZZ2 1709 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 MIS12Q9H081 205 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 RBM38Q9H0Z9 239 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 NDST4Q9H3R1 872 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ESRP2Q9H6T0 727 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ZWILCHQ9H900 591 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SLC28A3Q9HAS3 691 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 DMAP1Q9NPF5 467 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 HINT3Q9NQE9 182 aaKnown RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PLSCR4Q9NRQ2 329 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ANKEF1Q9NU02 776 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 NKIRAS2Q9NYR9 191 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 ATXN10Q9UBB4 475 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 FBXL17Q9UF56 701 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 POLG2Q9UHN1 485 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 BLOC1S6Q9UL45 172 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PCDHA7Q9UN72 937 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 DIP2CQ9Y2E4 1556 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 MROH7-TTC4A0A0A0MT08 1334 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 PASKQ96RG2 1323 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 SALL1Q9NSC2 1324 aa4.42□□□□□ -1.7
HMGB1P16-201ENST00000447155 TJP1Q07157 1748 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 IGHV4-28A0A0C4DH34 117 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 A0A1B0GVL5 298 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 EME2A4GXA9 379 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 O00370 1275 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 VCYO14598 125 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 CPLX1O14810 134 aa4.41□□□□□ -1.7
HMGB1P16-201ENST00000447155 TNFRSF13BO14836 293 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms