RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 KIR3DX1Q9H7L2 352 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 CHRAC1Q9NRG0 131 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 CATSPERZQ9NTU4 200 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 HRASLS2Q9NWW9 162 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 EPHA6Q9UF33 1036 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 SLC24A2Q9UI40 661 aa10.94□□□□□ -0.66
RFFL-204ENST00000414419 ZFHX4Q86UP3 3567 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 UBA6A0AVT1 1052 aaPredicted RBP10.93□□□□□ -0.66
RFFL-204ENST00000414419 OR6C74A6NCV1 312 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 OR5K3A6NET4 321 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.93□□□□□ -0.66
RFFL-204ENST00000414419 MGAT1P26572 445 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 COILP38432 576 aaPredicted RBP10.93□□□□□ -0.66
RFFL-204ENST00000414419 CD151P48509 253 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 TTPAP49638 278 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 CRADDP78560 199 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 RHDQ02161 417 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 PLOD1Q02809 727 aaPredicted RBP10.93□□□□□ -0.66
RFFL-204ENST00000414419 ACVR1Q04771 509 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 BOP1Q14137 746 aaKnown RBP10.93□□□□□ -0.66
RFFL-204ENST00000414419 BRD3Q15059 726 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 DNTTIP2Q5QJE6 756 aaKnown RBP10.93□□□□□ -0.66
RFFL-204ENST00000414419 CASC4Q6P4E1 433 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 LRRC8BQ6P9F7 803 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 MICALCLQ6ZW33 695 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 PRSS42Q7Z5A4 293 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 DTX1Q86Y01 620 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 ACVR1CQ8NER5 493 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 OR4E2Q8NGC2 313 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 ACTRT1Q8TDG2 376 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 LCN9Q8WX39 176 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 UBXN4Q92575 508 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 TFGQ92734 400 aaPredicted RBP10.93□□□□□ -0.66
RFFL-204ENST00000414419 PMEPA1Q969W9 287 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 SGSM3Q96HU1 749 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 CD180Q99467 661 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 SAMD15Q9P1V8 674 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 PRSS21Q9Y6M0 314 aa10.93□□□□□ -0.66
RFFL-204ENST00000414419 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 K7ENP7 123 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 CES2O00748 559 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 PFDN6O15212 129 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 CD3EAPO15446 510 aaKnown RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 KIF1CO43896 1103 aaKnown RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 OR1I1O60431 355 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 PHF2O75151 1096 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 TCP1P17987 556 aaKnown RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 PAMP19021 973 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 PDHA2P29803 388 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 PREPP48147 710 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 CYP1B1Q16678 543 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 TAF1BQ53T94 588 aaPredicted RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 TTC27Q6P3X3 843 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 INO80CQ6PI98 192 aaPredicted RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 VASH2Q86V25 355 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 RASGRP3Q8IV61 690 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 CACNA2D3Q8IZS8 1091 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 SIDT2Q8NBJ9 832 aaKnown RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 PHC3Q8NDX5 983 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 COG1Q8WTW3 980 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 OR6C1Q96RD1 312 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 OR52A5Q9H2C5 316 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 SRMSQ9H3Y6 488 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 MVB12BQ9H7P6 319 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 MRM3Q9HC36 420 aaKnown RBP10.92□□□□□ -0.66
RFFL-204ENST00000414419 APMAPQ9HDC9 416 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 PDE7BQ9NP56 450 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 SYBUQ9NX95 663 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 SNX12Q9UMY4 172 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 ASF1AQ9Y294 204 aa10.92□□□□□ -0.66
RFFL-204ENST00000414419 IGSF10Q6WRI0 2623 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 IGHV5-51A0A0C4DH38 117 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 TCRBV7S3A2A0A539 114 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 GSAPA4D1B5 854 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 TLCD2A6NGC4 264 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 ERVH48-1M5A8F1 160 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 MATN2O00339 956 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 PRMT5O14744 637 aaPredicted RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 EFSO43281 561 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 MAP3K7O43318 606 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 KDM1AO60341 852 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 RAD1O60671 282 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 NDUFS3O75489 264 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 STK17BO94768 372 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 VAPBO95292 243 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 ITGB6P18564 788 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 NELFEP18615 380 aaKnown RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 POLR2CP19387 275 aaPredicted RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 MAP4P27816 1152 aaKnown RBP10.91□□□□□ -0.66
RFFL-204ENST00000414419 NMBRP28336 390 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 FNTAP49354 379 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 GNG11P61952 73 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 PPP1CAP62136 330 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 SH3BP2P78314 561 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 PRKG2Q13237 762 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 IL11RAQ14626 422 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 KCNJ11Q14654 390 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 PPP1R7Q15435 360 aa10.91□□□□□ -0.66
RFFL-204ENST00000414419 KCTD19Q17RG1 926 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms