RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ROPN1LQ96C74 230 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 LRRC58Q96CX6 371 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 BBS2Q9BXC9 721 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 IPPKQ9H8X2 491 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 INTS7Q9NVH2 962 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 UBAP1Q9NZ09 502 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 APPL1Q9UKG1 709 aa14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 CNOT6Q9ULM6 557 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 MTCL1Q9Y4B5 1905 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-202ENST00000409472 TCRBV3S1A0A5B6 114 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 KIAA0355O15063 1070 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 RSL1D1O76021 490 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 GRIA3P42263 894 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 SNRPD1P62314 119 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 RHDQ02161 417 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 MTX3Q5HYI7 312 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 CCDC149Q6ZUS6 474 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 NAT16Q8N8M0 369 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 PCYOX1LQ8NBM8 494 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 SNRNP27Q8WVK2 155 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 SCRN2Q96FV2 425 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 ZSWIM3Q96MP5 696 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 TMEM74Q96NL1 305 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 EGFL8Q99944 293 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 SUV39H2Q9H5I1 410 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 B4GALT6Q9UBX8 382 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 PTBP2Q9UKA9 531 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 MAFFQ9ULX9 164 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 MYOCOSA0A1B0GUC4 107 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 GIPC1O14908 333 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 SYNCRIPO60506 623 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 CHEK2O96017 543 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 PORP16435 677 aaPredicted RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 GRIA2P42262 883 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 MAPK8P45983 427 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 ERVK-8P63133 956 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 HTRA4P83105 476 aaPredicted RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 CREMQ03060 361 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 ZXDCQ2QGD7 858 aaPredicted RBP14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 ZNF697Q5TEC3 545 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 MACC1Q6ZN28 852 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 AMIGO2Q86SJ2 522 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 SATL1Q86VE3 508 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 KIAA2013Q8IYS2 634 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 ELMOD1Q8N336 334 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 PROKR1Q8TCW9 393 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 CYB5D2Q8WUJ1 264 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 LYSMD1Q96S90 227 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 BRINP2Q9C0B6 783 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 LATS2Q9NRM7 1088 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 OARD1Q9Y530 152 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 AP4S1Q9Y587 144 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
SCAMP4-202ENST00000409472 SZT2Q5T011 3432 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 AGAP14A8MT82 685 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 RAD51BO15315 384 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 TIPRLO75663 272 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 TYRP14679 529 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 CCR7P32248 378 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 IRS1P35568 1242 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 PDK3Q15120 406 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 NRF1Q16656 503 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 POM121L1PQ3SYA9 428 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 RFTN2Q52LD8 501 aaPredicted RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 C6orf52Q5T4I8 152 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 GRAMD4Q6IC98 578 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 SLC2A7Q6PXP3 512 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 TPRG1Q6ZUI0 275 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 ADIPOR2Q86V24 386 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 CANT1Q8WVQ1 401 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 ING5Q8WYH8 240 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 CLP1Q92989 425 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 ASIC4Q96FT7 647 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 MCCC1Q96RQ3 725 aaPredicted RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 HTATIP2Q9BUP3 242 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 EPS15L1Q9UBC2 864 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 TMEM98Q9Y2Y6 226 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 POLR3HQ9Y535 204 aaPredicted RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 A0A1W2PP18 115 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 LSM1O15116 133 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 VPS4BO75351 444 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 SLC22A3O75751 556 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 G6PDP11413 515 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 MTHFD1P11586 935 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 PABPC1P11940 636 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 PSMC3P17980 439 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 WEE1P30291 646 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 OXTRP30559 389 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 NFYCQ13952 458 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 CBX2Q14781 532 aaPredicted RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 NR6A1Q15406 480 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 LY6G5CQ5SRR4 150 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 UGT2A3Q6UWM9 527 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 SERPINA13PQ6UXR4 307 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 SPATA19Q7Z5L4 167 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 IFNEQ86WN2 208 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 DHFR2Q86XF0 187 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 SPPL2CQ8IUH8 684 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 VRK3Q8IV63 474 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 TMEM199Q8N511 208 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms