RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 NSFP46459 744 aaKnown RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CAPZA2P47755 286 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 NT5C2P49902 561 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MTHFSP49914 203 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 P2RY4P51582 365 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 NR0B1P51843 470 aaKnown RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ARFIP1P53367 373 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ERVFC1P60507 584 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PURAQ00577 322 aaKnown RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF33AQ06730 810 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 KLRC3Q07444 240 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 INCA1Q0VD86 236 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ILF3Q12906 894 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ABRQ12979 859 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PDIA2Q13087 525 aaKnown RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 BIKQ13323 160 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SNTA1Q13424 505 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PNOCQ13519 176 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF273Q14593 569 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TTLL4Q14679 1199 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 RFTN1Q14699 578 aaPredicted RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SMAD1Q15797 465 aaKnown RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CYP1B1Q16678 543 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 HAGHQ16775 308 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 HIST2H2ACQ16777 129 aaPredicted RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CERKLQ49MI3 558 aaPredicted RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SFT2D3Q587I9 215 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 FAM47AQ5JRC9 791 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 UBXN11Q5T124 520 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 STXBP5Q5T5C0 1151 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 UBE2UQ5VVX9 321 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TIGD7Q6NT04 549 aaPredicted RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SCYL2Q6P3W7 929 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 GALNT18Q6P9A2 607 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 VSTM1Q6UX27 236 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 RTL4Q6ZR62 310 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TMPRSS11FQ6ZWK6 438 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 USP49Q70CQ1 688 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PDZD4Q76G19 769 aaPredicted RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 OTOP1Q7RTM1 612 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SMIM15Q7Z3B0 74 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 KDELC2Q7Z4H8 507 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 THAP5Q7Z6K1 395 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PRPF39Q86UA1 669 aaKnown RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 RASAL3Q86YV0 1011 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SLC22A9Q8IVM8 553 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 C10orf107Q8IVU9 208 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 KIAA0319LQ8IZA0 1049 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MCOLN2Q8IZK6 566 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TTC5Q8N0Z6 440 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SCML4Q8N228 414 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 STPG2Q8N412 459 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 LRRC17Q8N6Y2 441 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 LINC01356Q8N9X3 169 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ATG16L2Q8NAA4 619 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 AVL9Q8NBF6 648 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ADPRHL1Q8NDY3 354 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MCUQ8NE86 351 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 C7orf57Q8NEG2 295 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ABHD11Q8NFV4 315 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 NLGN2Q8NFZ4 835 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 OR7A2PQ8NGA2 310 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PLBD2Q8NHP8 589 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SLC7A14Q8TBB6 771 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PHOSPHO2Q8TCD6 241 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 AGR3Q8TD06 166 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF384Q8TF68 577 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TSPEARQ8WU66 669 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 DCAKDQ8WVC6 231 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CORO2AQ92828 525 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ART4Q93070 314 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 TMBIM1Q969X1 311 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ECHDC3Q96DC8 303 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 OTUB2Q96DC9 234 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 FAM122AQ96E09 287 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 KAZALD1Q96I82 304 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 FEM1CQ96JP0 617 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 FAM227BQ96M60 508 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PPM1MQ96MI6 270 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 HSPA12BQ96MM6 686 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 GCNAQ96QF7 691 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 OR5M11Q96RB7 305 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SLC9A7Q96T83 725 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SSX3Q99909 188 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 CITED2Q99967 270 aaPredicted RBP3.55□□□□□ -1.84
XRCC4-203ENST00000396027 THTPAQ9BU02 230 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MED18Q9BUE0 208 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 PTDSS2Q9BVG9 487 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 C1QTNF3Q9BXJ4 246 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SHARPINQ9H0F6 387 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SPNS1Q9H2V7 528 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 ARMC7Q9H6L4 198 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SMYD3Q9H7B4 428 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 MANSC1Q9H8J5 431 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 SPACA1Q9HBV2 294 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 VAT1LQ9HCJ6 419 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 IL26Q9NPH9 171 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 C1orf112Q9NSG2 853 aa3.55□□□□□ -1.84
XRCC4-203ENST00000396027 FAM49BQ9NUQ9 324 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms