RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CHD2O14647 1828 aaKnown RBP16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 SAGE2PA6NJ88 616 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 EI24O14681 340 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 NBNO60934 754 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 RPL17P18621 184 aaKnown RBP16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 FOXM1Q08050 763 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 AHSA2Q719I0 299 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 GJD3Q8N144 294 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 CAMKK1Q8N5S9 505 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 PCYT2Q99447 389 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 USP29Q9HBJ7 922 aa16.84■□□□□ 0.29
TRAPPC11-201ENST00000334690 TAF4O00268 1085 aa16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 ECI2O75521 394 aa16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 SF1Q15637 639 aaKnown RBP16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 PHTF2Q8N3S3 785 aa16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 C1GALT1C1Q96EU7 318 aa16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 ZBTB26Q9HCK0 441 aa16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 MRPL39Q9NYK5 338 aaKnown RBP16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 LRP6O75581 1613 aa16.83■□□□□ 0.29
TRAPPC11-201ENST00000334690 LTBP3Q9NS15 1303 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 FAM86C2PA6NEL3 165 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 CA12O43570 354 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 PI15O43692 258 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 EPOP01588 193 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 FESP07332 822 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 RHDQ02161 417 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 SERINC3Q13530 473 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 PYDC2Q56P42 97 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 AGMOQ6ZNB7 445 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 KAT6AQ92794 2004 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 LOC110117498-PIK3R3F6TDL0 507 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 PRPS1L1P21108 318 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 ECHS1P30084 290 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 ACLYP53396 1101 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 LRRC42Q9Y546 428 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 MYH8P13535 1937 aa16.83■□□□□ 0.28
TRAPPC11-201ENST00000334690 SRP54P61011 504 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 DAG1Q14118 895 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 DCST1Q5T197 706 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 CYS1Q717R9 158 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 TTC29Q8NA56 475 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 OR5K1Q8NHB7 308 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 VANGL1Q8TAA9 524 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC22A17Q8WUG5 538 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF514Q96K75 400 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 RPL10LQ96L21 214 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 MCCC1Q96RQ3 725 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 YTHDF1Q9BYJ9 559 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 GSAPA4D1B5 854 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 J3KR12 359 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 PGRMC2O15173 223 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 NDUFB5O43674 189 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 IFNGP01579 166 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 CCNHP51946 323 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 IFI44LQ53G44 452 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC43A3Q8NBI5 491 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 SMG7Q92540 1137 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC38A4Q969I6 547 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 TEPSINQ96N21 525 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 KLHL32Q96NJ5 620 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 GALNT8Q9NY28 637 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 MAP4K5Q9Y4K4 846 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 CLDN25C9JDP6 229 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 H0YC42 278 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 PSMD4P55036 377 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 AP1S2P56377 157 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF792Q3KQV3 632 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 KCTD8Q6ZWB6 473 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 EEF1AKMT1Q8WVE0 214 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 CGREF1Q99674 301 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 DIABLOQ9NR28 239 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 SOHLH2Q9NX45 425 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 PSAT1Q9Y617 370 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 LCHNA4D1U4 455 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 C9IYK1 514 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 E7ENX8 843 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 CDH1P12830 882 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 GJA9P57773 515 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 ATP13A5Q4VNC0 1218 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 LDLRAP1Q5SW96 308 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 RBM20Q5T481 1227 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 STRA6Q9BX79 667 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 MKS1Q9NXB0 559 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF282Q9UDV7 671 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 SLC2A6Q9UGQ3 507 aa16.82■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3DA0A087WVF3 549 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3IA0A087WXS9 549 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3EA0A087X179 549 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3KA0A087X1G2 549 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3FA6NER0 549 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3LB9A6J9 549 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3HP0C7X1 549 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 MOGSQ13724 837 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 CCL14Q16627 93 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 KLHL12Q53G59 568 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3GQ6DHY5 549 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms