RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 ABCB10Q9NRK6 738 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PYDC2Q56P42 97 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 TRPS1Q9UHF7 1281 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 DMTF1Q9Y222 760 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 DNAJA2O60884 412 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 FAM174BQ3ZCQ3 159 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 FAM171BQ6P995 826 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 ARHGAP22Q7Z5H3 698 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PSMA8Q8TAA3 256 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 SSR3Q9UNL2 185 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 MRPS7Q9Y2R9 242 aaKnown RBP16.98■□□□□ 0.31
CDCP1-201ENST00000296129 AK5Q9Y6K8 562 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 DOT1LQ8TEK3 1739 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 ALAS2P22557 587 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 LPIN1Q14693 890 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 KHDC1Q4VXA5 237 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 MBLAC2Q68D91 279 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 SLC34A3Q8N130 599 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 ZNF248Q8NDW4 579 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 C12orf66Q96MD2 445 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 CRTAC1Q9NQ79 661 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 SUCOQ9UBS9 1254 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 SCELO95171 688 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 MYL9P24844 172 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 RPS14P62263 151 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 LGALS3BPQ08380 585 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 RGS21Q2M5E4 152 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 PERM1Q5SV97 790 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 C11orf65Q8NCR3 313 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 BORCS6Q96GS4 357 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 MRTO4Q9UKD2 239 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 K7EPI3 171 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 ECI2O75521 394 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 THRBP10828 461 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 CDH3P22223 829 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 GATMP50440 423 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 TAB1Q15750 504 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 MS4A13Q5J8X5 152 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 CBR4Q8N4T8 237 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 ARL10Q8N8L6 244 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 CDKN2AIPNLQ96HQ2 116 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 PIRO00625 290 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 MYBPC1Q00872 1141 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 SRSF11Q05519 484 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 GPM6BQ13491 265 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 MZT2BQ6NZ67 158 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 RNF19BQ6ZMZ0 732 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 PHC3Q8NDX5 983 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 RIOK2Q9BVS4 552 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 SMPD3Q9NY59 655 aaPredicted RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 TOP3BO95985 862 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 IFNGP01579 166 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 YAP1P46937 504 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 MTPNP58546 118 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 NFKB2Q00653 900 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 LARS2Q15031 903 aaKnown RBP16.97■□□□□ 0.31
CDCP1-201ENST00000296129 THAP5Q7Z6K1 395 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 PIM3Q86V86 326 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 PQLC3Q8N755 202 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 FAM81AQ8TBF8 368 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 SLC13A3Q8WWT9 602 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 RACGAP1Q9H0H5 632 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 DPEP2Q9H4A9 486 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 BTBD3Q9Y2F9 522 aa16.97■□□□□ 0.31
CDCP1-201ENST00000296129 KRT33AO76009 404 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 GPIP06744 558 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SLC35G6P0C7Q6 338 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 PEX2P28328 305 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 CCR10P46092 362 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 GRSF1Q12849 480 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SLC22A17Q8WUG5 538 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 ZDHHC3Q9NYG2 299 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 FNIP2Q9P278 1114 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 IFT80Q9P2H3 777 aaPredicted RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 hCG_2039718K7EN88 272 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SAP18O00422 153 aaKnown RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 WNT9AO14904 365 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 CAPN15O75808 1086 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 IFNW1P05000 195 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 RPS9P46781 194 aaKnown RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SRP54P61011 504 aaKnown RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 POMZP3Q6PJE2 187 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 MTERF1Q99551 399 aaKnown RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 ABCG4Q9H172 646 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SCN11AQ9UI33 1791 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 CXCR6O00574 342 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 ADH5P11766 374 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 KLF1Q13351 362 aaPredicted RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 EEF1AKMT1Q8WVE0 214 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 PCDHGA11Q9Y5H2 935 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 TULP3O75386 442 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 ERN1O75460 977 aaKnown RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SIX3O95343 332 aaPredicted RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 ZBTB6Q15916 424 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 ST13P5Q8NFI4 369 aaPredicted RBP16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SRMSQ9H3Y6 488 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 SATB2Q9UPW6 733 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 TEX264Q9Y6I9 313 aa16.96■□□□□ 0.31
CDCP1-201ENST00000296129 A8MT66 165 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms