RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 PPP1CAP62136 330 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 BASP1P80723 227 aaKnown RBP20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 FOXM1Q08050 763 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 KRT33BQ14525 404 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 TAF1BQ53T94 588 aaPredicted RBP20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 CACHD1Q5VU97 1274 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 DRICH1Q6PGQ1 229 aaPredicted RBP20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 XKR5Q6UX68 686 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 CEACAM20Q6UY09 585 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 DTX1Q86Y01 620 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 CLDN19Q8N6F1 224 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 ZDHHC12Q96GR4 267 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 TEFMQ96QE5 360 aaKnown RBP20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 COG4Q9H9E3 785 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 CASS4Q9NQ75 786 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 SLC2A6Q9UGQ3 507 aa20.66■□□□□ 0.9
HCFC1R1-209ENST00000576921 EFSO43281 561 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 KCNJ1P48048 391 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 RHDQ02161 417 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 KCTD19Q17RG1 926 aaPredicted RBP20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 KLHL35Q6PF15 583 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 IL22RA1Q8N6P7 574 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 OR13J1Q8NGT2 312 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 SNRNP27Q8WVK2 155 aaKnown RBP20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.65■□□□□ 0.92e-6■■■■■ 54.9
HCFC1R1-209ENST00000576921 CCM2Q9BSQ5 444 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 FBXO8Q9NRD0 319 aa20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 DRG1Q9Y295 367 aaKnown RBP20.65■□□□□ 0.9
HCFC1R1-209ENST00000576921 GOLGA6L3A6NEY3 463 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 ERVH48-1M5A8F1 160 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 POLR1CO15160 346 aaPredicted RBP20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 ADRA1DP25100 572 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 FOXN2P32314 431 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 LAMB3Q13751 1172 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 TSTD2Q5T7W7 516 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 AFTPHQ6ULP2 937 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 PRSS42Q7Z5A4 293 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 CACNA2D3Q8IZS8 1091 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 PPHLN1Q8NEY8 458 aaKnown RBP20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 SLC39A7Q92504 469 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 NKD1Q969G9 470 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 HDAC10Q969S8 669 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 RNF31Q96EP0 1072 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 RANBP9Q96S59 729 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 ZNF768Q9H5H4 540 aaKnown RBP20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 SIDT1Q9NXL6 827 aaKnown RBP20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 TCAF1Q9Y4C2 921 aa20.64■□□□□ 0.89
HCFC1R1-209ENST00000576921 C17orf113A0A1B0GUU1 675 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 TOX3O15405 576 aaPredicted RBP20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 RAD1O60671 282 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 GOT2P00505 430 aaKnown RBP20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 PRB1P04280 392 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 PSMA3P25788 255 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 PREPP48147 710 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 TERF1P54274 439 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 SESN2P58004 480 aaPredicted RBP20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 SH3BP2P78314 561 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 OOSP2Q86WS3 158 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 OR6P1Q8NGX9 317 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 ZNF778Q96MU6 729 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 ZPBPQ9BS86 351 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 KIR3DX1Q9H7L2 352 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 EIF2B3Q9NR50 452 aaKnown RBP20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 EPHA6Q9UF33 1036 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 SLC24A2Q9UI40 661 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 PCDHGA4Q9Y5G9 962 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 HEBP2Q9Y5Z4 205 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 PRSS21Q9Y6M0 314 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 COLEC10Q9Y6Z7 277 aa20.63■□□□□ 0.89
HCFC1R1-209ENST00000576921 ATRXP46100 2492 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 OR5K3A6NET4 321 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 IFRD1O00458 451 aaPredicted RBP20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 AP2A2O94973 939 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 NSG1P42857 185 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 ARCN1P48444 511 aaKnown RBP20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 PRAMEP78395 509 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 ITIH4Q14624 930 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 DNTTIP2Q5QJE6 756 aaKnown RBP20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 CAPRIN2Q6IMN6 1127 aaKnown RBP20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 ZNF449Q6P9G9 518 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 C4orf22Q6V702 233 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 PRELID2Q8N945 189 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 ZSCAN1Q8NBB4 408 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 ELMO2Q96JJ3 720 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 OR6C1Q96RD1 312 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 FERD3LQ96RJ6 166 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 RAB33BQ9H082 229 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 HOMER3Q9NSC5 361 aa20.62■□□□□ 0.89
HCFC1R1-209ENST00000576921 OR6C74A6NCV1 312 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 STK17BO94768 372 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 WT1P19544 449 aaPredicted RBP20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 NDUFS1P28331 727 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 PDHA2P29803 388 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 VPS41P49754 854 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 CRADDP78560 199 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 BRD3Q15059 726 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 TRIP13Q15645 432 aaPredicted RBP20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 ARMC6Q6NXE6 501 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 PCSK4Q6UW60 755 aa20.61■□□□□ 0.89
HCFC1R1-209ENST00000576921 PACS1Q6VY07 963 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms