RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SCN7AQ01118 1682 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 SNX3O60493 162 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 CAPN1P07384 714 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PROZP22891 400 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PLEKHG6Q3KR16 790 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PAQR3Q6TCH7 311 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 OR4E2Q8NGC2 313 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 KBTBD7Q8WVZ9 684 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 XAGE5Q8WWM1 108 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 NCDNQ9UBB6 729 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 EGFL7Q9UHF1 273 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PIAS3Q9Y6X2 628 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 MYH14Q7Z406 1995 aaKnown RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 NBNO60934 754 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 APOA1P02647 267 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 EFNA1P20827 205 aaPredicted RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 IGFALSP35858 605 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 VWA5B1Q5TIE3 1220 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PPP1R14AQ96A00 147 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 TCHHQ07283 1943 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PDE9AO76083 593 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 ZCCHC18P0CG32 403 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 ACADSP16219 412 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 LCP2Q13094 533 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 DHDDSQ86SQ9 333 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF605Q86T29 641 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 TXNDC5Q8NBS9 432 aaKnown RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 RBM18Q96H35 190 aaKnown RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 CDK15Q96Q40 435 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 TMEM245Q9H330 911 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 PNO1Q9NRX1 252 aaKnown RBP17.09■□□□□ 0.33
PTPN21-208ENST00000556564 HCSTQ9UBK5 93 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 COPS7AQ9UBW8 275 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 ENOPH1Q9UHY7 261 aa17.09■□□□□ 0.33
PTPN21-208ENST00000556564 JAK1P23458 1154 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 ARRB1P49407 418 aaPredicted RBP17.08■□□□□ 0.33
PTPN21-208ENST00000556564 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 GPR141Q7Z602 305 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 FSTL5Q8N475 847 aaPredicted RBP17.08■□□□□ 0.33
PTPN21-208ENST00000556564 NCSTNQ92542 709 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 C1orf74Q96LT6 269 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 ZNF446Q9NWS9 450 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 DLGAP2Q9P1A6 1054 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 B4GALT6Q9UBX8 382 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 OAZ2O95190 189 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 KAT7O95251 611 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 CPN2P22792 545 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 SLC9A4Q6AI14 798 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 ZC3H3Q8IXZ2 948 aaKnown RBP17.08■□□□□ 0.33
PTPN21-208ENST00000556564 CYTH4Q9UIA0 394 aa17.08■□□□□ 0.33
PTPN21-208ENST00000556564 A0A0J9YVX5 310 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 MCIDASD6RGH6 385 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 MAN2B1O00754 1011 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 PI15O43692 258 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF648Q5T619 568 aaPredicted RBP17.08■□□□□ 0.32
PTPN21-208ENST00000556564 ERN2Q76MJ5 926 aaKnown RBP17.08■□□□□ 0.32
PTPN21-208ENST00000556564 SLC35B2Q8TB61 432 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 CNOT6Q9ULM6 557 aaKnown RBP17.08■□□□□ 0.32
PTPN21-208ENST00000556564 NEMP2A6NFY4 417 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 C9JVG2 144 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 PSMB9P28065 219 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 ASMTP46597 345 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 SEPHS1P49903 392 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 CCR8P51685 355 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 ARL13AQ5H913 290 aaPredicted RBP17.08■□□□□ 0.32
PTPN21-208ENST00000556564 PIK3R6Q5UE93 754 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 PIM3Q86V86 326 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 NAT8LQ8N9F0 302 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 PHF10Q8WUB8 498 aaKnown RBP17.08■□□□□ 0.32
PTPN21-208ENST00000556564 RELTQ969Z4 430 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 HIC2Q96JB3 615 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 SLC2A13Q96QE2 648 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 MTERF1Q99551 399 aaKnown RBP17.08■□□□□ 0.32
PTPN21-208ENST00000556564 SLC47A1Q96FL8 570 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 KLHL1Q9NR64 748 aa17.08■□□□□ 0.32
PTPN21-208ENST00000556564 ATP6V1G2O95670 118 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 KRT8P05787 483 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 GRIA2P42262 883 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF805Q5CZA5 627 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 RNF43Q68DV7 783 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 LRRC74BQ6ZQY2 392 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 ARMC8Q8IUR7 673 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 C9orf16Q9BUW7 83 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 MMADHCQ9H3L0 296 aaPredicted RBP17.07■□□□□ 0.32
PTPN21-208ENST00000556564 SLC2A4RGQ9NR83 387 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 A8MUA0 341 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 WASHC2DQ5SRD0 308 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 OFCC1Q8IZS5 231 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 CRYGNQ8WXF5 182 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 RC3H2Q9HBD1 1191 aaKnown RBP17.07■□□□□ 0.32
PTPN21-208ENST00000556564 PCDHGB3Q9Y5G1 929 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 OR10H3O60404 316 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 CEBPBP17676 345 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 MYL12AP19105 171 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 CDH5P33151 784 aaPredicted RBP17.07■□□□□ 0.32
PTPN21-208ENST00000556564 GSTM5P46439 218 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 CSNK2BP67870 215 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 ANGPT1Q15389 498 aa17.07■□□□□ 0.32
PTPN21-208ENST00000556564 NRF1Q16656 503 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms