RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 WWP1Q9H0M0 922 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 TRIT1Q9H3H1 467 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 EIF2B3Q9NR50 452 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 IMP3Q9NV31 184 aaKnown RBP12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 SDK2Q58EX2 2172 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 ATMQ13315 3056 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 PIKFYVEQ9Y2I7 2098 aa12.86□□□□□ -0.35
HNRNPC-205ENST00000553300 IFRD1O00458 451 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 EFSO43281 561 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 KALRNO60229 2985 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 CEP104O60308 925 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 RASSF9O75901 435 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 ARSDP51689 593 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 GFERP55789 205 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 PLOD1Q02809 727 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 KRT33BQ14525 404 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 IL11RAQ14626 422 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 ANKS6Q68DC2 871 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 CARFQ8N187 725 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 KLHL6Q8WZ60 621 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 UBXN4Q92575 508 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 RSC1A1Q92681 617 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 NKD1Q969G9 470 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 SGSM3Q96HU1 749 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 BBC3Q96PG8 261 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 CD180Q99467 661 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 EFHD1Q9BUP0 239 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 ZNF768Q9H5H4 540 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 KIR3DX1Q9H7L2 352 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 PIH1D1Q9NWS0 290 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 SEMA5BQ9P283 1151 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 PILRAQ9UKJ1 303 aa12.85□□□□□ -0.35
HNRNPC-205ENST00000553300 POLBP06746 335 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 ETS1P14921 441 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 MAP4P27816 1152 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 RPL22P35268 128 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 CDKN1CP49918 316 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 CDK16Q00536 496 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 ACVR1Q04771 509 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 CCDC38Q502W7 563 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 TAF1BQ53T94 588 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 TSTD2Q5T7W7 516 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 CACHD1Q5VU97 1274 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 IRGCQ6NXR0 463 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 AFTPHQ6ULP2 937 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 XKR5Q6UX68 686 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 PACS1Q6VY07 963 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 BPHLQ86WA6 291 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 KMT5CQ86Y97 462 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 PIANPQ8IYJ0 282 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 IL22RA1Q8N6P7 574 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 PPHLN1Q8NEY8 458 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 OR13J1Q8NGT2 312 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 GPR150Q8NGU9 434 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 PBKQ96KB5 322 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 NAP1L3Q99457 506 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 SPRY4Q9C004 299 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 COG4Q9H9E3 785 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 HRASLS2Q9NWW9 162 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 SIDT1Q9NXL6 827 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 SMARCAL1Q9NZC9 954 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 SLC24A2Q9UI40 661 aa12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 TMEM184BQ9Y519 407 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 CFAP20Q9Y6A4 193 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 FASNP49327 2511 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-205ENST00000553300 CCDC162PA2VCL2 907 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 OR5K3A6NET4 321 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 GOLGA6L3A6NEY3 463 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 MATN2O00339 956 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 LIN7AO14910 233 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 ZSCAN12O43309 604 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 FTH1P02794 183 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 ITGB2P05107 769 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 OR56A5P0C7T3 313 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 NELFEP18615 380 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 FOXN2P32314 431 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 GRIA1P42261 906 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 LEPRP48357 1165 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 NPY2RP49146 381 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 PRAMEP78395 509 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 FOXM1Q08050 763 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 MAP7Q14244 749 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 DBN1Q16643 649 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 AARS2Q5JTZ9 985 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 PCID2Q5JVF3 399 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 ARMC3Q5W041 872 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 ARMC6Q6NXE6 501 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 NLGN4XQ8N0W4 816 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.36
HNRNPC-205ENST00000553300 GLIS1Q8NBF1 620 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms