RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 UNC5BQ8IZJ1 945 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 PATE1Q8WXA2 126 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 SH3KBP1Q96B97 665 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 FMO2Q99518 471 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 UCK1Q9HA47 277 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 IARS2Q9NSE4 1012 aaKnown RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 LRIT1Q9P2V4 623 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 CEP295Q9C0D2 2601 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 CPED1A4D0V7 1026 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 SLC35G4P0C7Q5 338 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 RPL10P27635 214 aaKnown RBP19.03■□□□□ 0.64
DDX55-207ENST00000540763 ECHS1P30084 290 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 MAGEA4P43358 317 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 CD151P48509 253 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 HHEXQ03014 270 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 MGAT5Q09328 741 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 CTBP1Q13363 440 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 CTSL3PQ5NE16 218 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 TEDDM1Q5T9Z0 273 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 SFTPA2Q8IWL1 248 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 PALM2Q8IXS6 379 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 CFAP206Q8IYR0 622 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 EIF1ADQ8N9N8 165 aaKnown RBP19.03■□□□□ 0.64
DDX55-207ENST00000540763 ELMO1Q92556 727 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 CCDC74AQ96AQ1 378 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.03■□□□□ 0.64
DDX55-207ENST00000540763 NSMCE4AQ9NXX6 385 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 SCHIP1Q9P0W5 487 aaPredicted RBP19.03■□□□□ 0.64
DDX55-207ENST00000540763 CPNE7Q9UBL6 633 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 CORO1CQ9ULV4 474 aaPredicted RBP19.03■□□□□ 0.64
DDX55-207ENST00000540763 RNF215Q9Y6U7 377 aa19.03■□□□□ 0.64
DDX55-207ENST00000540763 SLC5A10A0PJK1 596 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 RHPN2P1A8MT19 583 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 MYF5P13349 255 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 PKMP14618 531 aaKnown RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 BIRC2Q13490 618 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 TMED2Q15363 201 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 SMAD1Q15797 465 aaKnown RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 SEPT7Q16181 437 aaKnown RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 PERM1Q5SV97 790 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 CAPRIN2Q6IMN6 1127 aaKnown RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 TRMT10BQ6PF06 316 aaKnown RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 SLC26A11Q86WA9 606 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 CCDC25Q86WR0 208 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 CACTIN-AS1Q8N1I8 211 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 LRRN4CLQ8ND94 238 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 ASZ1Q8WWH4 475 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 TMEM159Q96B96 161 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 CCDC3Q9BQI4 270 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 OR52A5Q9H2C5 316 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 CCDC68Q9H2F9 335 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 PPANQ9NQ55 473 aaKnown RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 FBXO6Q9NRD1 293 aaPredicted RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 LATS2Q9NRM7 1088 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 ZFATQ9P243 1243 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 ZNF624Q9P2J8 865 aaPredicted RBP19.02■□□□□ 0.64
DDX55-207ENST00000540763 WDR37Q9Y2I8 494 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 CRYL1Q9Y2S2 319 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 HEBP2Q9Y5Z4 205 aa19.02■□□□□ 0.64
DDX55-207ENST00000540763 LILRA5A6NI73 299 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 GPC4O75487 556 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 TCEA3O75764 348 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 APOA4P06727 396 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 RHOXF2BP0C7M4 288 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 AOAHP28039 575 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 FMO4P31512 558 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 CCR7P32248 378 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 SLC19A1P41440 591 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 EPHA4P54764 986 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 MPP1Q00013 466 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 CLCA4Q14CN2 919 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 CLPPQ16740 277 aaPredicted RBP19.01■□□□□ 0.63
DDX55-207ENST00000540763 SYTL3Q4VX76 610 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 ZNF789Q5FWF6 425 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 SPRED1Q7Z699 444 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 RAB44Q7Z6P3 723 aaPredicted RBP19.01■□□□□ 0.63
DDX55-207ENST00000540763 PDZD3Q86UT5 571 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 TRIM48Q8IWZ4 208 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 LILRA3Q8N6C8 439 aaPredicted RBP19.01■□□□□ 0.63
DDX55-207ENST00000540763 ZFPM2Q8WW38 1151 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 IFT81Q8WYA0 676 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 KCNJ9Q92806 393 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 CXorf40BQ96DE9 158 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 RHOXF2Q9BQY4 288 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 WWP1Q9H0M0 922 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 EPB41L1Q9H4G0 881 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 KLHL42Q9P2K6 505 aa19.01■□□□□ 0.63
DDX55-207ENST00000540763 IFRD1O00458 451 aaPredicted RBP19■□□□□ 0.63
DDX55-207ENST00000540763 NTN3O00634 580 aaPredicted RBP19■□□□□ 0.63
DDX55-207ENST00000540763 PPM1DO15297 605 aa19■□□□□ 0.63
DDX55-207ENST00000540763 OPA1O60313 960 aa19■□□□□ 0.63
DDX55-207ENST00000540763 VIPP01282 170 aa19■□□□□ 0.63
DDX55-207ENST00000540763 MTHFD1P11586 935 aaKnown RBP19■□□□□ 0.63
DDX55-207ENST00000540763 NDUFS1P28331 727 aa19■□□□□ 0.63
DDX55-207ENST00000540763 SSTR1P30872 391 aa19■□□□□ 0.63
DDX55-207ENST00000540763 STX2P32856 288 aa19■□□□□ 0.63
DDX55-207ENST00000540763 CARSP49589 748 aaKnown RBP19■□□□□ 0.63
DDX55-207ENST00000540763 GPLD1P80108 840 aa19■□□□□ 0.63
DDX55-207ENST00000540763 BOP1Q14137 746 aaKnown RBP19■□□□□ 0.63
DDX55-207ENST00000540763 RPE65Q16518 533 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms