RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 EIF3HO15372 352 aaKnown RBP eCLIP22.8■■□□□ 1.24
SUMO3-205ENST00000466861 DUX1O43812 170 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 ESR1P03372 595 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 ZFP36L1Q07352 338 aaKnown RBP22.8■■□□□ 1.24
SUMO3-205ENST00000466861 FRG1Q14331 258 aaKnown RBP22.8■■□□□ 1.24
SUMO3-205ENST00000466861 CRYMQ14894 314 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 RTP5Q14D33 572 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 MSS51Q4VC12 460 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 MMGT1Q8N4V1 131 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 LPGAT1Q92604 370 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 TMEM159Q96B96 161 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 LIN37Q96GY3 246 aaPredicted RBP22.8■■□□□ 1.24
SUMO3-205ENST00000466861 FAM167BQ9BTA0 163 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 WWP1Q9H0M0 922 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 OR52A5Q9H2C5 316 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 DKK4Q9UBT3 224 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 ENTPD2Q9Y5L3 495 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 TEX264Q9Y6I9 313 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 COLEC10Q9Y6Z7 277 aa22.8■■□□□ 1.24
SUMO3-205ENST00000466861 TPRP12270 2363 aaKnown RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 SLC5A10A0PJK1 596 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 FAM149AA5PLN7 773 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 TMEM8BA6NDV4 472 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 OR52A4PA6NMU1 304 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 IFRD1O00458 451 aaPredicted RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 EIF3IQ13347 325 aaKnown RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 TRA2AQ13595 282 aaKnown RBP eCLIP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 PTRHD1Q6GMV3 140 aaKnown RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 C8orf74Q6P047 294 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 WDR74Q6RFH5 385 aaPredicted RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 LDB1Q86U70 411 aaPredicted RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 OR4D9Q8NGE8 314 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 NAT14Q8WUY8 206 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 ELMO1Q92556 727 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 AHCYL2Q96HN2 611 aaKnown RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 C12orf66Q96MD2 445 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 TRIM56Q9BRZ2 755 aaKnown RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 FOXP3Q9BZS1 431 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 STRADBQ9C0K7 418 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 SYNDIG1Q9H7V2 258 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 C20orf96Q9NUD7 363 aaPredicted RBP22.79■■□□□ 1.24
SUMO3-205ENST00000466861 PSMD13Q9UNM6 376 aa22.79■■□□□ 1.24
SUMO3-205ENST00000466861 CTAGE15A4D2H0 777 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 CTAGE8P0CG41 777 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 INHBCP55103 352 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 CLDN6P56747 220 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 MAP9Q49MG5 647 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 STEAP4Q687X5 459 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 CENPUQ71F23 418 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 CTAGE6Q86UF2 777 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 SLITRK4Q8IW52 837 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 CTAGE4Q8IX94 777 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 ASZ1Q8WWH4 475 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 NXPE2Q96DL1 559 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 RMDN2Q96LZ7 410 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 INSM2Q96T92 566 aaPredicted RBP22.78■■□□□ 1.24
SUMO3-205ENST00000466861 GRHL1Q9NZI5 618 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 PDP2Q9P2J9 529 aa22.78■■□□□ 1.24
SUMO3-205ENST00000466861 TRABD2BA6NFA1 517 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 S1PR4O95977 384 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 APOA4P06727 396 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 ELK3P41970 407 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 MLLT3P42568 568 aaPredicted RBP22.77■■□□□ 1.24
SUMO3-205ENST00000466861 PDX1P52945 283 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 TMED2Q15363 201 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 AMZ1Q400G9 498 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 SYTL3Q4VX76 610 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 GLE1Q53GS7 698 aaKnown RBP22.77■■□□□ 1.24
SUMO3-205ENST00000466861 ZNF470Q6ECI4 717 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 TMEM71Q6P5X7 295 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 IGF2-ASQ6U949 168 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 KIAA0408Q6ZU52 694 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 GALNT7Q86SF2 657 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 PDZD3Q86UT5 571 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 KCNMB4Q86W47 210 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 LILRA3Q8N6C8 439 aaPredicted RBP22.77■■□□□ 1.24
SUMO3-205ENST00000466861 CEP112Q8N8E3 955 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 SEC14L1Q92503 715 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 ART4Q93070 314 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 BIRC8Q96P09 236 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 FAM129AQ9BZQ8 928 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 RAB33BQ9H082 229 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 DPH5Q9H2P9 285 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 MVB12BQ9H7P6 319 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 IMP3Q9NV31 184 aaKnown RBP22.77■■□□□ 1.24
SUMO3-205ENST00000466861 ZC3H7BQ9UGR2 993 aaKnown RBP22.77■■□□□ 1.24
SUMO3-205ENST00000466861 COMMD10Q9Y6G5 202 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 SPEGQ15772 3267 aa22.77■■□□□ 1.24
SUMO3-205ENST00000466861 CEP295Q9C0D2 2601 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 CCDC187A0A096LP49 1063 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 UBA6A0AVT1 1052 aaPredicted RBP22.76■■□□□ 1.23
SUMO3-205ENST00000466861 GOLGA8KD6RF30 607 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 GOLGA8TH3BQL2 631 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 GPC4O75487 556 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 CCR7P32248 378 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 LIMK2P53671 638 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 MRPS25P82663 173 aaKnown RBP22.76■■□□□ 1.23
SUMO3-205ENST00000466861 PDIA2Q13087 525 aaKnown RBP22.76■■□□□ 1.23
SUMO3-205ENST00000466861 GPR18Q14330 331 aa22.76■■□□□ 1.23
SUMO3-205ENST00000466861 KLHL35Q6PF15 583 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms