RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NUSAP1Q9BXS6 441 aaKnown RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 SGK2Q9HBY8 427 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 DHRS7Q9Y394 339 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ANKRD12Q6UB98 2062 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 HIDE1A8MVS5 230 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 GJA8P48165 433 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 IRX1P78414 480 aaPredicted RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 CNTN1Q12860 1018 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ISCA2Q86U28 154 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 TSPAN33Q86UF1 283 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 PIANPQ8IYJ0 282 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 MAGED4Q96JG8 741 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ZNF641Q96N77 438 aaPredicted RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 PHPT1Q9NRX4 125 aaPredicted RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 STX16-NPEPL1H3BU86 382 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ABLIM3O94929 683 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 EPN2O95208 641 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 OAS1P00973 400 aaKnown RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ATP1B2P14415 290 aaPredicted RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 MAT2AP31153 395 aaKnown RBP13.82□□□□□ -0.2
SCAF4-202ENST00000399804 LDLRAP1Q5SW96 308 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 MANEALQ5VSG8 457 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 AP1ARQ63HQ0 302 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 GAREM2Q75VX8 874 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 KRT78Q8N1N4 520 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ACTRT2Q8TDY3 377 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 OSCP1Q8WVF1 389 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 PANX1Q96RD7 426 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 FBXO10Q9UK96 956 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 ERVW-1Q9UQF0 538 aa13.82□□□□□ -0.2
SCAF4-202ENST00000399804 SLC31A1O15431 190 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 SRCP12931 536 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 GABRB3P28472 473 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 HPCAL1P37235 193 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 SGSHP51688 502 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ERVFC1P60507 584 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ARF5P84085 180 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 CD300LGQ6UXG3 332 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 VITQ6UXI7 678 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 MZB1Q8WU39 189 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 UBE2E3Q969T4 207 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 SLC7A6OSQ96CW6 309 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-202ENST00000399804 MTG2Q9H4K7 406 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 TBX21Q9UL17 535 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 DHRS12A0PJE2 317 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 RFXANKO14593 260 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 SCAMP1O15126 338 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 SGTAO43765 313 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 GSNP06396 782 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ITGAXP20702 1163 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 GRM2Q14416 872 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 DHCR24Q15392 516 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 PPP1R3AQ16821 1122 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 FLCNQ8NFG4 579 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 SPPL2AQ8TCT8 520 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ZNF570Q96NI8 536 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 POPDC3Q9HBV1 291 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ZDHHC4Q9NPG8 344 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 PAK6Q9NQU5 681 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-202ENST00000399804 IL17CQ9P0M4 197 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 PDP2Q9P2J9 529 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 HSFX1Q9UBD0 423 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 FAF1Q9UNN5 650 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-202ENST00000399804 IGLV3-10A0A075B6K4 115 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 TTC34A8MYJ7 566 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 MMP20O60882 483 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ZNF30P17039 623 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 FDXRP22570 491 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ARCN1P48444 511 aaKnown RBP13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ACTR3P61158 418 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ERVK-21P61565 698 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 CHST14Q8NCH0 376 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 PRICKLE1Q96MT3 831 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-202ENST00000399804 ZSCAN5AQ9BUG6 496 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 UGT2B28Q9BY64 529 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 CWH43Q9H720 699 aa13.81□□□□□ -0.2
SCAF4-202ENST00000399804 TRIM45Q9H8W5 580 aaPredicted RBP13.81□□□□□ -0.2
SCAF4-202ENST00000399804 F11P03951 625 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 ATXN1LP0C7T5 689 aaKnown RBP13.8□□□□□ -0.2
SCAF4-202ENST00000399804 CTSOP43234 321 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-202ENST00000399804 SLC43A3Q8NBI5 491 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 MYRFLQ96LU7 910 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 FERD3LQ96RJ6 166 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 TUBGCP5Q96RT8 1024 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 SLC39A3Q9BRY0 314 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 TRPC4Q9UBN4 977 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 C16orf96A6NNT2 1141 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 CACNB4O00305 520 aaPredicted RBP13.8□□□□□ -0.2
SCAF4-202ENST00000399804 ETV3P41162 512 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 BNIP2Q12982 314 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 UNC50Q53HI1 259 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 HTR3DQ70Z44 454 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 MAPK15Q8TD08 544 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 ZNF556Q9HAH1 456 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 CLDND1Q9NY35 253 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 SDHDO14521 159 aa13.8□□□□□ -0.2
SCAF4-202ENST00000399804 GPR39O43194 453 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms