RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 DMPKQ09013 629 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 PRRT3Q5FWE3 981 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 TNFAIP8L3Q5GJ75 292 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 TTC19Q6DKK2 380 aaPredicted RBP16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 LVRNQ6Q4G3 990 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 AMZ2Q86W34 360 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 PANX3Q96QZ0 392 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 CCM2Q9BSQ5 444 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 MCMBPQ9BTE3 642 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 LRRC61Q9BV99 259 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 TSSK1BQ9BXA7 367 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 PCDHGB2Q9Y5G2 931 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 GVINP1Q7Z2Y8 2422 aa16.79■□□□□ 0.28
RPRD1A-209ENST00000590898 MGAT4DA6NG13 374 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 AQP9O43315 295 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 TCEA3O75764 348 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 PKMP14618 531 aaKnown RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 DGKAP23743 735 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 EPHA8P29322 1005 aaPredicted RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 FMO4P31512 558 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CD151P48509 253 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CSE1LP55060 971 aaKnown RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CTBSQ01459 385 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 ILF3Q12906 894 aaKnown RBP eCLIP16.78■□□□□ 0.283e-7■■■■■ 32.4
RPRD1A-209ENST00000590898 SLC14A1Q13336 389 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 PTRHD1Q6GMV3 140 aaKnown RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CNSTQ6PJW8 725 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CHST15Q7LFX5 561 aaPredicted RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 STRA8Q7Z7C7 330 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CTAGE3PQ8IX95 158 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 OR2L2Q8NH16 312 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 SAP25Q8TEE9 199 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 GSDMCQ9BYG8 508 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CCDC68Q9H2F9 335 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 TM7SF3Q9NS93 570 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 TXNDC16Q9P2K2 825 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 PRKAB1Q9Y478 270 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 PSAT1Q9Y617 370 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 LMO7DNF2Z398 122 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CDX4O14627 284 aaPredicted RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CD9P21926 228 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 GP5P40197 560 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 ARHGAP8P85298 464 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 BNIP3Q12983 259 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 SUZ12Q15022 739 aaKnown RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 TERF2Q15554 542 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 KLHL38Q2WGJ6 581 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 CRTC3Q6UUV7 619 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 DBX2Q6ZNG2 339 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 GKN2Q86XP6 184 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 PPM1NQ8N819 430 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 ZNF548Q8NEK5 533 aaPredicted RBP16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 IL21RQ9HBE5 538 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 LATS2Q9NRM7 1088 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 SLC23A2Q9UGH3 650 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 FETUBQ9UGM5 382 aa16.78■□□□□ 0.28
RPRD1A-209ENST00000590898 PRR19A6NJB7 356 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 TPP1O14773 563 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 SCAMP1O15126 338 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 KPNA5O15131 536 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 CREB1P16220 341 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 INSCQ1MX18 579 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 CTSL3PQ5NE16 218 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 GRTP1Q5TC63 336 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 KANSL1Q7Z3B3 1105 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 ZC3HC1Q86WB0 502 aaKnown RBP16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 CNPY4Q8N129 248 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 SLC25A45Q8N413 288 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 BEND7Q8N7W2 519 aaPredicted RBP16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 LMX1AQ8TE12 382 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 EDEM2Q9BV94 578 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 RHOJQ9H4E5 214 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 TMEM9BQ9NQ34 198 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 KLHL42Q9P2K6 505 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 GULP1Q9UBP9 304 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 ST14Q9Y5Y6 855 aa16.77■□□□□ 0.28
RPRD1A-209ENST00000590898 CDH16O75309 829 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 ACP5P13686 325 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 PLOD1Q02809 727 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 GABPB1Q06547 395 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 TMED2Q15363 201 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 METRNLQ641Q3 311 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 ZNF549Q6P9A3 640 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 EXOC3L1Q86VI1 746 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 NRROSQ86YC3 692 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 HM13Q8TCT9 377 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 KCNJ9Q92806 393 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 CCDC77Q9BR77 488 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 AARSD1Q9BTE6 412 aaKnown RBP16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 KLC4Q9NSK0 619 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 SLC17A6Q9P2U8 582 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 ACSL5Q9ULC5 683 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 PCNX2A6NKB5 2137 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 SPRP35270 261 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 PPP2R2AP63151 447 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 C1orf61Q13536 156 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 AASDHQ4L235 1098 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 ZNF658BQ4V348 819 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 WASH2PQ6VEQ5 465 aa16.76■□□□□ 0.27
RPRD1A-209ENST00000590898 TAF8Q7Z7C8 310 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms