RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RPS26P62854 115 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 SIM1P81133 766 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 SEMA3AQ14563 771 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 TRIP6Q15654 476 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 HS1BP3Q53T59 392 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 GPRC6AQ5T6X5 926 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 RNASEH2BQ5TBB1 312 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 CES3Q6UWW8 571 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 PPP1R21Q6ZMI0 780 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 C11orf96Q7Z7L8 435 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 GLRX5Q86SX6 157 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 LINC00523Q86TU6 105 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 JAMLQ86YT9 394 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 SLC35F3Q8IY50 421 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 RASGEF1AQ8N9B8 481 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 DNAAF3Q8N9W5 541 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 KYQ8NBH2 561 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 SPATA4Q8NEY3 305 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 CDKN2AIPNLQ96HQ2 116 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 CNDP2Q96KP4 475 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 APOLD1Q96LR9 279 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 TBATAQ96M53 351 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 VPS35Q96QK1 796 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 SRPK1Q96SB4 655 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 KRT12Q99456 494 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 WDR83Q9BRX9 315 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 CHRAC1Q9NRG0 131 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 NLE1Q9NVX2 485 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 KCTD5Q9NXV2 234 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 SPASTQ9UBP0 616 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 GULP1Q9UBP9 304 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 WASF3Q9UPY6 502 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 PKP3Q9Y446 797 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 DMXL2Q8TDJ6 3036 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 TRBV5-4A0A0C4DH59 114 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 GOLGA6L10A0A0M3HER8 536 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 PRR19A6NJB7 356 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 H7C0S8 307 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 CHUKO15111 745 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 YKT6O15498 198 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 NUAK1O60285 661 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 NOBOXO60393 691 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SLC25A14O95258 325 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 ASMTLO95671 621 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 CRTAMO95727 393 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 TNFP01375 233 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 FTH1P19P0C7X4 201 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SPINK2P20155 84 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 NMBRP28336 390 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 FOXN2P32314 431 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 ACTN2P35609 894 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 MAGEA3P43357 314 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 ACADVLP49748 655 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 DR1Q01658 176 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 ACVR1Q04771 509 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 NFATC2Q13469 925 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 TRADDQ15628 312 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 PLA2G4EQ3MJ16 856 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 FNBP1LQ5T0N5 605 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 TSTD2Q5T7W7 516 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 PDPK2PQ6A1A2 396 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 GUSBP11Q6P575 273 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SLC30A9Q6PML9 568 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 CRTC3Q6UUV7 619 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 ZNF572Q7Z3I7 529 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 RELL1Q8IUW5 271 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 PHYKPLQ8IUZ5 450 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 PHC3Q8NDX5 983 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 DDHD1Q8NEL9 900 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 ZNF398Q8TD17 642 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 DTX3LQ8TDB6 740 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 GPBAR1Q8TDU6 330 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 FCRL3Q96P31 734 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SERPINB12Q96P63 405 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 RANBP9Q96S59 729 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 BOCQ9BWV1 1114 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SLC13A1Q9BZW2 595 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 ASB8Q9H765 288 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 PLAC1Q9HBJ0 212 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 TRIM39Q9HCM9 518 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SMOXQ9NWM0 555 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 NLGN3Q9NZ94 848 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 IL1RAPL1Q9NZN1 696 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SIRPGQ9P1W8 387 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 VPS18Q9P253 973 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 MARCH4Q9P2E8 410 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 FTSJ1Q9UET6 329 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 FEZ2Q9UHY8 353 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 KCNK6Q9Y257 313 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 TCAF1Q9Y4C2 921 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 CSNK1G3Q9Y6M4 447 aa9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 COL27A1Q8IZC6 1860 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-219ENST00000576713 SPTBN2O15020 2390 aa9.32□□□□□ -0.92
NPLOC4-219ENST00000576713 A6NCN8 305 aa9.32□□□□□ -0.92
NPLOC4-219ENST00000576713 B4DGG1 531 aa9.32□□□□□ -0.92
NPLOC4-219ENST00000576713 C9orf172C9J069 976 aa9.32□□□□□ -0.92
NPLOC4-219ENST00000576713 DNALI1O14645 258 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-219ENST00000576713 RAD51CO43502 376 aa9.32□□□□□ -0.92
NPLOC4-219ENST00000576713 PPFIA2O75334 1257 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms