RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PPP1R2P1Q96PQ5 205 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 INSM2Q96T92 566 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 C19orf43Q9BQ61 176 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 FEZ2Q9UHY8 353 aaPredicted RBP14.35□□□□□ -0.11
FANCA-220ENST00000566409 PILRAQ9UKJ1 303 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 PCDHB11Q9Y5F2 797 aa14.35□□□□□ -0.11
FANCA-220ENST00000566409 MGAT4DA6NG13 374 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 LIASO43766 372 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 ZNF189O75820 626 aaPredicted RBP14.34□□□□□ -0.11
FANCA-220ENST00000566409 AP2A1O95782 977 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 AMD1P17707 334 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 HALP42357 657 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 CAPZBP47756 277 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 RAB15P59190 212 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 CYP4F2P78329 520 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 PDE1BQ01064 536 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 LINC00303Q3SY05 128 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 BCL7AQ4VC05 210 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 SNX20Q7Z614 316 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 PRUNE1Q86TP1 453 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 RBM12BQ8IXT5 1001 aaKnown RBP14.34□□□□□ -0.11
FANCA-220ENST00000566409 OR2L2Q8NH16 312 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 LINC00615Q96LM1 132 aaPredicted RBP14.34□□□□□ -0.11
FANCA-220ENST00000566409 WWP1Q9H0M0 922 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 LRRC40Q9H9A6 602 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 EPHA6Q9UF33 1036 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 CRLS1Q9UJA2 301 aa14.34□□□□□ -0.11
FANCA-220ENST00000566409 CFAP20Q9Y6A4 193 aaKnown RBP14.34□□□□□ -0.11
FANCA-220ENST00000566409 SPTBP11277 2137 aa14.33□□□□□ -0.11
FANCA-220ENST00000566409 IGLV3-16A0A075B6K0 115 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 TRBV5-4A0A0C4DH59 114 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 H7C0S8 307 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 ETS1P14921 441 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 PSMA3P25788 255 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 MC4RP32245 332 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 HADHAP40939 763 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 SEPHS1P49903 392 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 GSDMDP57764 484 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 SH3BP2P78314 561 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 POU6F1Q14863 301 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 SIX1Q15475 284 aaPredicted RBP14.33□□□□□ -0.12
FANCA-220ENST00000566409 P3H1Q32P28 736 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 ZNF658BQ4V348 819 aaPredicted RBP14.33□□□□□ -0.12
FANCA-220ENST00000566409 MEI1Q5TIA1 1274 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 DUS1LQ6P1R4 473 aaKnown RBP14.33□□□□□ -0.12
FANCA-220ENST00000566409 FAM92BQ6ZTR7 304 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 SLC13A5Q86YT5 568 aaPredicted RBP14.33□□□□□ -0.12
FANCA-220ENST00000566409 PIANPQ8IYJ0 282 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 EXD3Q8N9H8 876 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 GLIS1Q8NBF1 620 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 C1orf54Q8WWF1 131 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 RNF31Q96EP0 1072 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 CDKN2AIPNLQ96HQ2 116 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 TEFMQ96QE5 360 aaKnown RBP14.33□□□□□ -0.12
FANCA-220ENST00000566409 SLC12A9Q9BXP2 914 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 RAB33BQ9H082 229 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 ZNF768Q9H5H4 540 aaKnown RBP14.33□□□□□ -0.12
FANCA-220ENST00000566409 NLE1Q9NVX2 485 aaPredicted RBP14.33□□□□□ -0.12
FANCA-220ENST00000566409 FAM8A1Q9UBU6 413 aa14.33□□□□□ -0.12
FANCA-220ENST00000566409 MROH6A6NGR9 719 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 TOX3O15405 576 aaPredicted RBP14.32□□□□□ -0.12
FANCA-220ENST00000566409 ARHGAP6O43182 974 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 KRT86O43790 486 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 RAD1O60671 282 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 POLBP06746 335 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 MTHFD1P11586 935 aaKnown RBP14.32□□□□□ -0.12
FANCA-220ENST00000566409 ATP1B2P14415 290 aaPredicted RBP14.32□□□□□ -0.12
FANCA-220ENST00000566409 LIFP15018 202 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 ITGALP20701 1170 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 STIP1P31948 543 aaKnown RBP14.32□□□□□ -0.12
FANCA-220ENST00000566409 GRIA1P42261 906 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 PRLHRP49683 370 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 C19orf57Q0VDD7 668 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 GPR33Q49SQ1 333 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 CAPRIN2Q6IMN6 1127 aaKnown RBP14.32□□□□□ -0.12
FANCA-220ENST00000566409 CEACAM20Q6UY09 585 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 PRSS42Q7Z5A4 293 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 SERPINA9Q86WD7 417 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 CFAP206Q8IYR0 622 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 CACNA2D3Q8IZS8 1091 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 OR52K1Q8NGK4 314 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 KLHL6Q8WZ60 621 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 EXTL1Q92935 676 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 ULK4Q96C45 1275 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 RMDN2Q96LZ7 410 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 COPS8Q99627 209 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 ETNK1Q9HBU6 452 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 IMP3Q9NV31 184 aaKnown RBP14.32□□□□□ -0.12
FANCA-220ENST00000566409 ZDHHC3Q9NYG2 299 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 SEMA5BQ9P283 1151 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 ACSL5Q9ULC5 683 aa14.32□□□□□ -0.12
FANCA-220ENST00000566409 TMEM184BQ9Y519 407 aaPredicted RBP14.32□□□□□ -0.12
FANCA-220ENST00000566409 IGHV5-51A0A0C4DH38 117 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 CCDC78A2IDD5 438 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 POLR1CO15160 346 aaPredicted RBP14.31□□□□□ -0.12
FANCA-220ENST00000566409 PSMD3O43242 534 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 STK17BO94768 372 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 DLGAP3O95886 979 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 ZNF28P17035 718 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms