RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GPR89BP0CG08 455 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 FGF3P11487 239 aaPredicted RBP15.42■□□□□ 0.06
USB1-208ENST00000563207 PLA2G2AP14555 144 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 MGAT1P26572 445 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 MLLT3P42568 568 aaPredicted RBP15.42■□□□□ 0.06
USB1-208ENST00000563207 RPL21P46778 160 aaKnown RBP15.42■□□□□ 0.06
USB1-208ENST00000563207 TERF1P54274 439 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 CYP4F2P78329 520 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 RHDQ02161 417 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 CBLBQ13191 982 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 GPR33Q49SQ1 333 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 ALS2CLQ60I27 953 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 PHYKPLQ8IUZ5 450 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 PDIK1LQ8N165 341 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 LSM14AQ8ND56 463 aaKnown RBP15.42■□□□□ 0.06
USB1-208ENST00000563207 OR13C4Q8NGS5 318 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 ZNF398Q8TD17 642 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 SLC37A2Q8TED4 501 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 GLYATL1Q969I3 302 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 CCDC97Q96F63 343 aaPredicted RBP15.42■□□□□ 0.06
USB1-208ENST00000563207 CDKN2AIPNLQ96HQ2 116 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 SGSM3Q96HU1 749 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 NAT9Q9BTE0 207 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 TRIM31Q9BZY9 425 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 SMOXQ9NWM0 555 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 VPS18Q9P253 973 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 ZNHIT2Q9UHR6 403 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 SOX13Q9UN79 622 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 KCNK6Q9Y257 313 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 KCTD3Q9Y597 815 aa15.42■□□□□ 0.06
USB1-208ENST00000563207 PIEZO2Q9H5I5 2752 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 AGAP14A8MT82 685 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 GOLGA8MH3BSY2 632 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 SRP72O76094 671 aaKnown RBP15.41■□□□□ 0.06
USB1-208ENST00000563207 SLC25A14O95258 325 aaPredicted RBP15.41■□□□□ 0.06
USB1-208ENST00000563207 PRAMEF1O95521 474 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 ITGALP20701 1170 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 ITGA8P53708 1063 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 XIAPP98170 497 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 CHRNA6Q15825 494 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 KCTD19Q17RG1 926 aaPredicted RBP15.41■□□□□ 0.06
USB1-208ENST00000563207 LINC00303Q3SY05 128 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 ATP13A5Q4VNC0 1218 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 CCDC38Q502W7 563 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 DNAJC21Q5F1R6 531 aaKnown RBP15.41■□□□□ 0.06
USB1-208ENST00000563207 LDLRAP1Q5SW96 308 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 FAM151BQ6UXP7 276 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 CHST15Q7LFX5 561 aaPredicted RBP15.41■□□□□ 0.06
USB1-208ENST00000563207 SNX20Q7Z614 316 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 EXD3Q8N9H8 876 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 ULK4Q96C45 1275 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 LRRC39Q96DD0 335 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 DNAJC1Q96KC8 554 aaKnown RBP15.41■□□□□ 0.06
USB1-208ENST00000563207 CMKLR1Q99788 373 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 LRRC1Q9BTT6 524 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 FAM129AQ9BZQ8 928 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 RMI1Q9H9A7 625 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 TRIM39Q9HCM9 518 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 CHRAC1Q9NRG0 131 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 TBC1D29Q9UFV1 150 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 FKBPLQ9UIM3 349 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 ACSL6Q9UKU0 697 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 SNX24Q9Y343 169 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
USB1-208ENST00000563207 HELZ2Q9BYK8 2649 aaKnown RBP15.4■□□□□ 0.06
USB1-208ENST00000563207 FAM237BA0A1B0GVD1 139 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 GAPDHSO14556 408 aaPredicted RBP15.4■□□□□ 0.06
USB1-208ENST00000563207 VEGFDO43915 354 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 AVILO75366 819 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 PAMP19021 973 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 ARL4CP56559 192 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 NFATC2Q13469 925 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 PEX6Q13608 980 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 PTPRCAPQ14761 206 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 CASC4Q6P4E1 433 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 ZNF605Q86T29 641 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 GALNT13Q8IUC8 556 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 OR13J1Q8NGT2 312 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 HEXDCQ8WVB3 486 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 SEC14L1Q92503 715 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 RNF31Q96EP0 1072 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 SIGLEC10Q96LC7 697 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 CARD6Q9BX69 1037 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 ZCCHC2Q9C0B9 1178 aaKnown RBP15.4■□□□□ 0.06
USB1-208ENST00000563207 ASB8Q9H765 288 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 TREX1Q9NSU2 369 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 OCIAD1Q9NX40 245 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 SYBUQ9NX95 663 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 KCNK4Q9NYG8 393 aa15.4■□□□□ 0.06
USB1-208ENST00000563207 ZNF462Q96JM2 2506 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 A8MU76 341 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 TTC4O95801 387 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 LIPCP11150 499 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 ACP5P13686 325 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 MC4RP32245 332 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 PPARGP37231 505 aaPredicted RBP15.39■□□□□ 0.05
USB1-208ENST00000563207 LIMK2P53671 638 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 TUBB4BP68371 445 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 PRAMEP78395 509 aa15.39■□□□□ 0.05
USB1-208ENST00000563207 TMPRSS15P98073 1019 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms