RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DAAM2Q86T65 1068 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 PLXDC1Q8IUK5 500 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 TRAPPC5Q8IUR0 188 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 TRIM48Q8IWZ4 208 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 AVL9Q8NBF6 648 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 GALNT6Q8NCL4 622 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 GDAP1Q8TB36 358 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 DTX3LQ8TDB6 740 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 RSC1A1Q92681 617 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 RBM41Q96IZ5 413 aaKnown RBP11.63□□□□□ -0.55
GABPB1-206ENST00000543881 TGM7Q96PF1 710 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 WASH6PQ9NQA3 447 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 HACD3Q9P035 362 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 RSPH14Q9UHP6 348 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 TRHDEQ9UKU6 1024 aa11.63□□□□□ -0.55
GABPB1-206ENST00000543881 REXO2Q9Y3B8 237 aaKnown RBP11.63□□□□□ -0.55
GABPB1-206ENST00000543881 TEP1Q99973 2627 aaKnown RBP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 SHANK1Q9Y566 2161 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 GLYATL1P3A0A0U1RQE8 302 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 H7C0C1 242 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 KIF1CO43896 1103 aaKnown RBP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 POP7O75817 140 aaKnown RBP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 DNAJB5O75953 348 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 ANKRD34CP0C6C1 535 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 HLA-DPA1P20036 260 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 IDSP22304 550 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 FECHP22830 423 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 CTNNA1P35221 906 aaKnown RBP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 ATP5OP48047 213 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 SH3BP2P78314 561 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 OTUD4Q01804 1114 aaKnown RBP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 XRCC4Q13426 336 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 SPA17Q15506 151 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 GPRC6AQ5T6X5 926 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 ZNF787Q6DD87 383 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 AADACL2Q6P093 401 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 FAM83HQ6ZRV2 1179 aaPredicted RBP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 DDHD1Q8NEL9 900 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 ACTL9Q8TC94 416 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 BRSK1Q8TDC3 778 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 NAT14Q8WUY8 206 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 STAMBPL1Q96FJ0 436 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 FAM118BQ9BPY3 351 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 FICDQ9BVA6 458 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 TWSG1Q9GZX9 223 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 GBA3Q9H227 469 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 POT1Q9NUX5 634 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 KCND3Q9UK17 655 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 PCDHA3Q9Y5H8 950 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 ARL5AQ9Y689 179 aa11.62□□□□□ -0.55
GABPB1-206ENST00000543881 EPN1Q9Y6I3 576 aaPredicted RBP11.62□□□□□ -0.55
GABPB1-206ENST00000543881 PIPSLA2A3N6 862 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 OR2AG2A6NM03 316 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 CREG1O75629 220 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 NDUFA10O95299 355 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 AMD1P17707 334 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 COL8A1P27658 744 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 ADRA1AP35348 466 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 CYLC1P35663 651 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-206ENST00000543881 SEPHS1P49903 392 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 ZNF75DP51815 510 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 COPS2P61201 443 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 PPP1CAP62136 330 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 DMPKQ09013 629 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 MSLNQ13421 630 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-206ENST00000543881 GTF2H3Q13889 308 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 NADK2Q4G0N4 442 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 LDLRAP1Q5SW96 308 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 ZDHHC20Q5W0Z9 365 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 TMEM220Q6QAJ8 160 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 RANBP10Q6VN20 620 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 RAD9BQ6WBX8 426 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 APLFQ8IW19 511 aaPredicted RBP11.61□□□□□ -0.55
GABPB1-206ENST00000543881 GPR150Q8NGU9 434 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 ALG3Q92685 438 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 CXorf40BQ96DE9 158 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 TTC25Q96NG3 672 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 PANX2Q96RD6 677 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 APOL2Q9BQE5 337 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 FSD1LQ9BXM9 530 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 LACRTQ9GZZ8 138 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 ZNF106Q9H2Y7 1883 aaKnown RBP11.61□□□□□ -0.55
GABPB1-206ENST00000543881 ZNF768Q9H5H4 540 aaKnown RBP11.61□□□□□ -0.55
GABPB1-206ENST00000543881 MAP4K5Q9Y4K4 846 aa11.61□□□□□ -0.55
GABPB1-206ENST00000543881 MED13Q9UHV7 2174 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 PJA2O43164 708 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 KIAA0754O94854 1291 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 RECKO95980 971 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 VCLP18206 1134 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 PSMB4P28070 264 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 TNNT3P45378 269 aaPredicted RBP11.6□□□□□ -0.55
GABPB1-206ENST00000543881 CAPZBP47756 277 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 GEMP55040 296 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 SEMA5AQ13591 1074 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 NFE2L1Q14494 772 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 ANKRD20A2Q5SQ80 823 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 ANKRD20A1Q5TYW2 823 aa11.6□□□□□ -0.55
GABPB1-206ENST00000543881 ANKRD20A3Q5VUR7 823 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 1059.7 ms