RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 NEPROQ6NW34 567 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 TRMT10BQ6PF06 316 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CAPN12Q6ZSI9 719 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CENPUQ71F23 418 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 KCNMB4Q86W47 210 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 SFRP1Q8N474 314 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 GPR150Q8NGU9 434 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 OR2L2Q8NH16 312 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 FBXO25Q8TCJ0 367 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 NAT6Q93015 286 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 RMDN2Q96LZ7 410 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 TTC1Q99614 292 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CCM2Q9BSQ5 444 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 COG4Q9H9E3 785 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 EPB41L5Q9HCM4 733 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 SAYSD1Q9NPB0 183 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 FBXO6Q9NRD1 293 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 IARS2Q9NSE4 1012 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 NCKIPSDQ9NZQ3 722 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 ZC3H7BQ9UGR2 993 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CRYL1Q9Y2S2 319 aa12.58□□□□□ -0.4
VEGFA-224ENST00000523873 CFAP20Q9Y6A4 193 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 SNRNP200O75643 2136 aaKnown RBP12.58□□□□□ -0.4
VEGFA-224ENST00000523873 RHPN2P1A8MT19 583 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 ZNF500O60304 480 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 OPA1O60313 960 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 AP2A2O94973 939 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 TRIM16O95361 564 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 RPLP0P05388 317 aaKnown RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 OR56A5P0C7T3 313 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 GLB1P16278 677 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 OGNP20774 298 aaKnown RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 PDHA2P29803 388 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 FMO4P31512 558 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 SLC19A1P41440 591 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 TTPAP49638 278 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 OR1D5P58170 312 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 UBE2IP63279 158 aaKnown RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 ILKQ13418 452 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 TYSND1Q2T9J0 566 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 CTSL3PQ5NE16 218 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 HES3Q5TGS1 186 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 METRNLQ641Q3 311 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 MRNIPQ6NTE8 343 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 ABRAXAS1Q6UWZ7 409 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 RAB44Q7Z6P3 723 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 SDCCAG8Q86SQ7 713 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 CCDC25Q86WR0 208 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 CILP2Q8IUL8 1156 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 ZBED8Q8IZ13 594 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 HM13Q8TCT9 377 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 JPH3Q8WXH2 748 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 ELMO1Q92556 727 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 LPGAT1Q92604 370 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 P2RY12Q9H244 342 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 KLK13Q9UKR3 277 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 ATXN7L1Q9ULK2 861 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-224ENST00000523873 KNTC1P50748 2209 aa12.57□□□□□ -0.4
VEGFA-224ENST00000523873 A0A1W2PQM1 296 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 ESPNB1AK53 854 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 BHMG1C9JSJ3 638 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 PRMT5O14744 637 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 NDC80O14777 642 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 B4GAT1O43505 415 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 NUDT21O43809 227 aaKnown RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 KCNJ13O60928 360 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 NIPSNAP2O75323 286 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 S1PR4O95977 384 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 GP1BAP07359 652 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 ALDH4A1P30038 563 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 CCR7P32248 378 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 PPARGP37231 505 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 ABCG1P45844 678 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 CARSP49589 748 aaKnown RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 HHEXQ03014 270 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 BOP1Q14137 746 aaKnown RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 AMZ1Q400G9 498 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 AGAP9Q5VTM2 703 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 NKAIN2Q5VXU1 208 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 PTRHD1Q6GMV3 140 aaKnown RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 ERMP1Q7Z2K6 904 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 SPRED1Q7Z699 444 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 CCNJLQ8IV13 435 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 TRIM48Q8IWZ4 208 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 CERS2Q96G23 380 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 INSM2Q96T92 566 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 TBC1D10AQ9BXI6 508 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 LRRN3Q9H3W5 708 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 PPANQ9NQ55 473 aaKnown RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 ZDHHC18Q9NUE0 388 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 IMP3Q9NV31 184 aaKnown RBP12.56□□□□□ -0.4
VEGFA-224ENST00000523873 CPNE7Q9UBL6 633 aa12.56□□□□□ -0.4
VEGFA-224ENST00000523873 ADAMTS20P59510 1910 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 KIR2DS5A0A0G2JLQ3 304 aa12.55□□□□□ -0.4
VEGFA-224ENST00000523873 A0A0G2JNG1 304 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms