RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PYCR2Q96C36 320 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 SLC47A1Q96FL8 570 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 GOLGA2P5Q9HBQ8 144 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 RGS18Q9NS28 235 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ADPRHL2Q9NX46 363 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 C3orf18Q9UK00 162 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ZNF221Q9UK13 617 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 FBXW11Q9UKB1 542 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 GSTA4O15217 222 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 PSMD3O43242 534 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 C22orf31O95567 290 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 DBTP11182 482 aaKnown RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 CD1DP15813 335 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 PFKLP17858 780 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 CLK1P49759 484 aaKnown RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 EPS8Q12929 822 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 CELF3Q5SZQ8 465 aaKnown RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 CILP2Q8IUL8 1156 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 NLGN4XQ8N0W4 816 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 CRYBG2Q8N1P7 616 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ATPAF2Q8N5M1 289 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 BEST2Q8NFU1 509 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 OR2T11Q8NH01 316 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ESAMQ96AP7 390 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ISG20Q96AZ6 181 aaKnown RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 RDH12Q96NR8 316 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ARPC5LQ9BPX5 153 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 TBCDQ9BTW9 1192 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ACTR8Q9H981 624 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 OSGIN1Q9UJX0 560 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 PCDHB14Q9Y5E9 798 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 CSADQ9Y600 493 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 FAM172BPA6NC97 362 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 H0Y626 953 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 CA12O43570 354 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 TSPAN1O60635 241 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 TRIM16O95361 564 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 HLA-DQB2P05538 268 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 CCDC159P0C7I6 412 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 MTHFD2P13995 350 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ACVR2AP27037 513 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ARSDP51689 593 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ZNF181Q2M3W8 571 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ZNF404Q494X3 552 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ATP6AP1LQ52LC2 224 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 SNAP47Q5SQN1 464 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ATAD3CQ5T2N8 411 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 CES5AQ6NT32 575 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 RFPL4BQ6ZWI9 263 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 FKBP9P1Q75LS8 142 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 FNDC5Q8NAU1 212 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ZNF540Q8NDQ6 660 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 REXO4Q9GZR2 422 aaKnown RBP13.57□□□□□ -0.24
NPHP4-207ENST00000470763 RNF186Q9NXI6 227 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ADGRE2Q9UHX3 823 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 FNDC1Q4ZHG4 1894 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-207ENST00000470763 CASP8AP2Q9UKL3 1982 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 AGAP5A6NIR3 686 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 SUPT3HB4E1H0 165 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 CCRL2O00421 344 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 TXNP10599 105 aaKnown RBP13.57□□□□□ -0.24
NPHP4-207ENST00000470763 GGT1P19440 569 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 CLCNKBP51801 687 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 TRAF3Q13114 568 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 GDPD3Q7L5L3 318 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 PROKR1Q8TCW9 393 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 SLC10A4Q96EP9 437 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 SLC2A13Q96QE2 648 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 FCRL5Q96RD9 977 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 MED10Q9BTT4 135 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 COLEC11Q9BWP8 271 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 OR2B2Q9GZK3 357 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 R3HDMLQ9H3Y0 253 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 RIBC2Q9H4K1 309 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 WDCPQ9H6R7 721 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 KAT8Q9H7Z6 458 aaKnown RBP13.57□□□□□ -0.24
NPHP4-207ENST00000470763 CARD8Q9Y2G2 431 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 TSC2P49815 1807 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 TYW5A2RUC4 315 aaKnown RBP13.57□□□□□ -0.24
NPHP4-207ENST00000470763 PRKD3O94806 890 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 PGLSO95336 258 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 ADRA1AP35348 466 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 NFKB2Q00653 900 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 TNFAIP1Q13829 316 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 SLC14A2Q15849 920 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 C9orf57Q5W0N0 161 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 DLEU7Q6UYE1 221 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 BCL7BQ9BQE9 202 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 PLSCR3Q9NRY6 295 aa13.57□□□□□ -0.24
NPHP4-207ENST00000470763 PDZK1P1A8MUH7 402 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 AP3D1O14617 1153 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 USP17L7P0C7H9 530 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 INSRRP14616 1297 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 DCTP40126 519 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 GEMP55040 296 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 SLC35A2P78381 396 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 FXNQ16595 210 aa13.56□□□□□ -0.24
NPHP4-207ENST00000470763 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms