RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 THRAP10827 490 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 NMBRP28336 390 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 MAPK9P45984 424 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 LSSP48449 732 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 NPY2RP49146 381 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 ZFP36L1Q07352 338 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 SEMA3AQ14563 771 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 TBC1D25Q3MII6 688 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 FASTKD1Q53R41 847 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 AARS2Q5JTZ9 985 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 METRNLQ641Q3 311 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 DUS1LQ6P1R4 473 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 FOXR1Q6PIV2 292 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 IGF2-ASQ6U949 168 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 TMEM26Q6ZUK4 368 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 PIM3Q86V86 326 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 CAND1Q86VP6 1230 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 RBM12BQ8IXT5 1001 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 LILRA3Q8N6C8 439 aaPredicted RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 OR4L1Q8NH43 312 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 AHCYL2Q96HN2 611 aaKnown RBP12.64□□□□□ -0.39
COL5A1-206ENST00000465877 SGSM3Q96HU1 749 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 CCDC74BQ96LY2 380 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 RMDN2Q96LZ7 410 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 KIFC1Q9BW19 673 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 WWP1Q9H0M0 922 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 SEMA6CQ9H3T2 930 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 EPB41L1Q9H4G0 881 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 UCK1Q9HA47 277 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 ASCL3Q9NQ33 180 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 TMEM9Q9P0T7 183 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 PCYOX1Q9UHG3 505 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 SOX13Q9UN79 622 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 LOXL2Q9Y4K0 774 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 PCDHGA8Q9Y5G5 932 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 PRSS21Q9Y6M0 314 aa12.64□□□□□ -0.39
COL5A1-206ENST00000465877 MN1Q10571 1320 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 PRAMEF33A0A0G2JMD5 474 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 IGHV5-10-1A0A0J9YXX1 117 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 SRRM3A6NNA2 597 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 GOLGA8MH3BSY2 632 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 TAF4O00268 1085 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 QSOX1O00391 747 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 PLD2O14939 933 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 TLX3O43711 291 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 AVILO75366 819 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 AP2A2O94973 939 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 MTHFD1P11586 935 aaKnown RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 MLNP12872 115 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 HGFP14210 728 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 MAGEA3P43357 314 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 CAPZBP47756 277 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 LIMK2P53671 638 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 CFHR1Q03591 330 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 GPR18Q14330 331 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 C16orf72Q14CZ0 275 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 RPE65Q16518 533 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 ZNF658BQ4V348 819 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 RNASEH2BQ5TBB1 312 aaKnown RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 LYPLAL1Q5VWZ2 237 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 ZNF574Q6ZN55 896 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 USP53Q70EK8 1073 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 RAB11FIP2Q7L804 512 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 PPIL6Q8IXY8 311 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 MPP5Q8N3R9 675 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 NAT8LQ8N9F0 302 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 RCBTB1Q8NDN9 531 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 MCUQ8NE86 351 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 OR4D9Q8NGE8 314 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 SNIP1Q8TAD8 396 aaKnown RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 MFSD3Q96ES6 412 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 PRR11Q96HE9 360 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 RUNDC3BQ96NL0 473 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 DPYSL5Q9BPU6 564 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 SLC40A1Q9NP59 571 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 IMP3Q9NV31 184 aaKnown RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 MARCH4Q9P2E8 410 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 ACSL5Q9ULC5 683 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 RAXQ9Y2V3 346 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 CFAP20Q9Y6A4 193 aaKnown RBP12.63□□□□□ -0.39
COL5A1-206ENST00000465877 LOC400499M0QZD8 3231 aa12.63□□□□□ -0.39
COL5A1-206ENST00000465877 SDK2Q58EX2 2172 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 C17orf113A0A1B0GUU1 675 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 CCDC188H7C350 402 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 AGRPO00253 132 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 DNALI1O14645 258 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 HGSO14964 777 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 OR1I1O60431 355 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 UBXN7O94888 489 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 FTH1P02794 183 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 ITGA2BP08514 1039 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 GSTM1P09488 218 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 JMJD7P0C870 316 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 ARNTP27540 789 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-206ENST00000465877 PAFAH1B1P43034 410 aa12.62□□□□□ -0.39
COL5A1-206ENST00000465877 PTGIRP43119 386 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms