RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 SGSM3Q96HU1 749 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 TLR10Q9BXR5 811 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 ILKAPQ9H0C8 392 aaPredicted RBP16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 FANCLQ9NW38 375 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 HRASLS2Q9NWW9 162 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 PSMD13Q9UNM6 376 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 MTORP42345 2549 aa16.76■□□□□ 0.27
UBE2D4-209ENST00000454428 MASP2O00187 686 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 ZG16O60844 167 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 KLF7O75840 302 aaPredicted RBP16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 DMPKQ09013 629 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 TMEM115Q12893 351 aaPredicted RBP16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 BECN1Q14457 450 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 MYBPC3Q14896 1274 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 LLGL1Q15334 1064 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 IFI16Q16666 785 aaKnown RBP16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 KYNUQ16719 465 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 PTCHD3Q3KNS1 767 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 ANO6Q4KMQ2 910 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 ZNF385CQ66K41 422 aaPredicted RBP16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 TIGD7Q6NT04 549 aaPredicted RBP16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 KLHL35Q6PF15 583 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 ZNF571Q7Z3V5 609 aaPredicted RBP16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 MRGPREQ86SM8 312 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 KCNMB4Q86W47 210 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 TRAPPC5Q8IUR0 188 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 CNTD1Q8N815 330 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 OR1L3Q8NH93 324 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 VPS35Q96QK1 796 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 LIMA1Q9UHB6 759 aaKnown RBP16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 ZNF711Q9Y462 761 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 CSAG2Q9Y5P2 127 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 PCM1Q15154 2024 aa16.75■□□□□ 0.27
UBE2D4-209ENST00000454428 SVILO95425 2214 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 SLC4A1P02730 911 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 TPM2P07951 284 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 HALP42357 657 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 ARCN1P48444 511 aaKnown RBP16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 UBXN1Q04323 297 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 PLCL1Q15111 1095 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 ATP13A5Q4VNC0 1218 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 E4F1Q66K89 784 aaPredicted RBP16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 DUS1LQ6P1R4 473 aaKnown RBP16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 CLIP3Q96DZ5 547 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 BTBD6Q96KE9 485 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 ADGRE3Q9BY15 652 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 MAGEE1Q9HCI5 957 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 MYO1AQ9UBC5 1043 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 OSGIN2Q9Y236 505 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 CFAP20Q9Y6A4 193 aaKnown RBP16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 SCINQ9Y6U3 715 aa16.74■□□□□ 0.27
UBE2D4-209ENST00000454428 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.273e-16■■■■■ 79.6
UBE2D4-209ENST00000454428 AURKAO14965 403 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 MTHFD1P11586 935 aaKnown RBP16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 GZMAP12544 262 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 OTX2P32243 289 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 GLRBP48167 497 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 CTSCP53634 463 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 SLC10A2Q12908 348 aaPredicted RBP16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 DPYSL3Q14195 570 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 NAA30Q147X3 362 aaPredicted RBP16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 LYPLAL1Q5VWZ2 237 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 HGSNATQ68CP4 663 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 ZC3H18Q86VM9 953 aaKnown RBP16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 TMEM151BQ8IW70 566 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 GALNT16Q8N428 558 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 INSM2Q96T92 566 aaPredicted RBP16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 HAUS4Q9H6D7 363 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 ACTR5Q9H9F9 607 aaPredicted RBP16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 TMEM63CQ9P1W3 806 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 MED13LQ71F56 2210 aa16.73■□□□□ 0.27
UBE2D4-209ENST00000454428 DOCK10Q96BY6 2186 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 OR6C74A6NCV1 312 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 LRRC10BA6NIK2 292 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 SLC9B1P1A6NJY1 282 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 PRSS44E7EML9 344 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 POP7O75817 140 aaKnown RBP16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 CCDC172P0C7W6 258 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 VCLP18206 1134 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 GBE1Q04446 702 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 ZBTB17Q13105 803 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 NFE2L1Q14494 772 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 KRT81Q14533 505 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 DCAF10Q5QP82 559 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 CCDC122Q5T0U0 273 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 TMTC4Q5T4D3 741 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 AMZ2Q86W34 360 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 OOSP2Q86WS3 158 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 RAB43Q86YS6 212 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 CARFQ8N187 725 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 NIPA2Q8N8Q9 360 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 RASGEF1AQ8N9B8 481 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 RAD18Q9NS91 495 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 IMP3Q9NV31 184 aaKnown RBP16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 SOHLH2Q9NX45 425 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 SLC24A2Q9UI40 661 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 SPO11Q9Y5K1 396 aa16.72■□□□□ 0.27
UBE2D4-209ENST00000454428 NUP210LQ5VU65 1888 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 TMEM150CB9EJG8 249 aa16.71■□□□□ 0.27
UBE2D4-209ENST00000454428 KCNK1O00180 336 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms