RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ROBO2Q9HCK4 1378 aa4.92□□□□□ -1.62
EPHA3-202ENST00000452448 ADGRL3Q9HAR2 1447 aa4.92□□□□□ -1.62
EPHA3-202ENST00000452448 MARF1Q9Y4F3 1742 aaKnown RBP4.92□□□□□ -1.62
EPHA3-202ENST00000452448 RNF103-CHMP3A0A140T963 221 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 LCHNA4D1U4 455 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF729A6NN14 1252 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 A8MXQ7 604 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ADAMTS3O15072 1205 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PRODHO43272 600 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 HS6ST1O60243 411 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 JAK2O60674 1132 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZFPL1O95159 310 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 XRCC1P18887 633 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NAMPTP43490 491 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 RPL5P46777 297 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 EIF3BP55884 814 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NUP107P57740 925 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SELENOVP59797 346 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ERVFC1P60507 584 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 COPZ1P61923 177 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 MRPS9P82933 396 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 DEFA6Q01524 100 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 HSF2Q03933 536 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 GPM6BQ13491 265 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 THOC5Q13769 683 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 FAM110CQ1W6H9 321 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 C2CD6Q53TS8 623 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 BEX5Q5H9J7 111 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PRAMEF20Q5VT98 475 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NANOGP8Q6NSW7 305 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CDC73Q6P1J9 531 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ABHD17CQ6PCB6 329 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TMEM108Q6UXF1 575 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SCARA5Q6ZMJ2 495 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CFAP77Q6ZQR2 320 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 FRA10AC1Q70Z53 315 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 G2E3Q7L622 706 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 HEATR3Q7Z4Q2 680 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TRIM69Q86WT6 500 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 MAML2Q8IZL2 1156 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 RASGEF1CQ8N431 466 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 IL17RCQ8NAC3 791 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 BPIFCQ8NFQ6 507 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 OR2L3Q8NG85 312 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 OR52H1Q8NGJ2 320 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NT5C3BQ969T7 300 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 REPS1Q96D71 796 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 C10orf90Q96M02 699 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 LRFN5Q96NI6 719 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 LGMNQ99538 433 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF184Q99676 751 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 LRRC1Q9BTT6 524 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 THUMPD3Q9BV44 507 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 RBM38Q9H0Z9 239 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZMAT3Q9HA38 289 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 POLD4Q9HCU8 107 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 FBXO28Q9NVF7 368 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 COPG2Q9UBF2 871 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 HCSTQ9UBK5 93 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 MORF4L1Q9UBU8 362 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SLC13A4Q9UKG4 626 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CAMK2AQ9UQM7 478 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 KCNE2Q9Y6J6 123 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 V9GYQ6 96 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SPACA6W5XKT8 324 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 UTYO14607 1347 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NPHP3Q7Z494 1330 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CHD4Q14839 1912 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PQLC2LA1A4F0 135 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 KPNA7A9QM74 516 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 EML1O00423 815 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 FCHO1O14526 889 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 DAPK3O43293 454 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TBX1O43435 398 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CST8O60676 142 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 DTNBO60941 627 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SPAG6O75602 509 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 POP7O75817 140 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 GATBO75879 557 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TNNC2P02585 160 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ERBB2P04626 1255 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SLC2A1P11166 492 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 JUPP14923 745 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PTPN1P18031 435 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TYMPP19971 482 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 LAP3P28838 519 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ALDH3B2P48448 385 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CCT3P49368 545 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 WDR4P57081 412 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SUMO1P63165 101 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 DSG1Q02413 1049 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 RPL6Q02878 288 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TROAPQ12815 778 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 GPS1Q13098 491 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NFIXQ14938 502 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZNHIT3Q15649 155 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TTC38Q5R3I4 469 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF468Q5VIY5 522 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ATG16L1Q676U5 607 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TCEAL6Q6IPX3 200 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms