RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TMEM102Q8N9M5 508 aaPredicted RBP17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 OR8K5Q8NH50 307 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 ZNF501Q96CX3 271 aaPredicted RBP17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 SNRNP40Q96DI7 357 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 IMP4Q96G21 291 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 SGSM3Q96HU1 749 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 C12orf66Q96MD2 445 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 TLR10Q9BXR5 811 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 NLNQ9BYT8 704 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 ZCCHC2Q9C0B9 1178 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 ASF1BQ9NVP2 202 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 UBP1Q9NZI7 540 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 SLC5A6Q9Y289 635 aa17.59■□□□□ 0.41
CHCHD3-203ENST00000448878 UGT1A9O60656 530 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 PMPCBO75439 489 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 LCA5LO95447 670 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 MT-CYBP00156 380 aaPredicted RBP17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 LDLRP01130 860 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 CYP1A2P05177 515 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 RAB40ALP0C0E4 278 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 UGT1A6P19224 532 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 CDH3P22223 829 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 UGT1A1P22309 533 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 UGT1A4P22310 534 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 TAS2R40P59535 323 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 IFI35P80217 286 aaPredicted RBP17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 GSE1Q14687 1217 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 PLEKHN1Q494U1 663 aaPredicted RBP17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 DUS1LQ6P1R4 473 aaKnown RBP17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 FAM83HQ6ZRV2 1179 aaPredicted RBP17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 B4GALNT4Q76KP1 1039 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 DSELQ8IZU8 1212 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 RASGEF1AQ8N9B8 481 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 ADAMTS17Q8TE56 1095 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 SRPK1Q96SB4 655 aaKnown RBP17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 UGT1A7Q9HAW7 530 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 UGT1A10Q9HAW8 530 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 UGT1A8Q9HAW9 530 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 CTTNBP2NLQ9P2B4 639 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 SPO11Q9Y5K1 396 aa17.58■□□□□ 0.4
CHCHD3-203ENST00000448878 CREBBPQ92793 2442 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 NDST3O95803 873 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 MTHFD1P11586 935 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 POLR2CP19387 275 aaPredicted RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 CYP2A7P20853 494 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 OTX2P32243 289 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 TNNT3P45378 269 aaPredicted RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 CTSCP53634 463 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 PRKAA1Q13131 559 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 ATP1A4Q13733 1029 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 HGSNATQ68CP4 663 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 FAM151BQ6UXP7 276 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 DET1Q7L5Y6 550 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 ZBTB2Q8N680 514 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 PPM1MQ96MI6 270 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 RNF157Q96PX1 679 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 INSM2Q96T92 566 aaPredicted RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 MAK16Q9BXY0 300 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 XPO4Q9C0E2 1151 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 NAT10Q9H0A0 1025 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 WWP1Q9H0M0 922 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 SLC25A51Q9H1U9 297 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 GTF3C3Q9Y5Q9 886 aa17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 BZW2Q9Y6E2 419 aaKnown RBP17.57■□□□□ 0.4
CHCHD3-203ENST00000448878 MED13Q9UHV7 2174 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 ANKUB1A6NFN9 424 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 SLC9B1P1A6NJY1 282 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 TMEM150CB9EJG8 249 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 CBX6O95503 412 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 KDELR1P24390 212 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 AKT1P31749 480 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 KPNA2P52292 529 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 DMPKQ09013 629 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 PTCHD3Q3KNS1 767 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 LDLRAP1Q5SW96 308 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 FNBP1LQ5T0N5 605 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 ZNF517Q6ZMY9 492 aaPredicted RBP17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 SYTL1Q8IYJ3 562 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 GLIS1Q8NBF1 620 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 TTC13Q8NBP0 860 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 OR4E2Q8NGC2 313 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 RAPGEF5Q92565 580 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 FAF2Q96CS3 445 aa17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 NAP1L5Q96NT1 182 aaPredicted RBP17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 SMAD5Q99717 465 aaKnown RBP17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 ILKAPQ9H0C8 392 aaPredicted RBP17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 ACTR5Q9H9F9 607 aaPredicted RBP17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 RP1L1Q8IWN7 2480 aaPredicted RBP17.56■□□□□ 0.4
CHCHD3-203ENST00000448878 A0A087X0T9 212 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 LRRD1A4D1F6 860 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 WIPF3A6NGB9 483 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 GPR39O43194 453 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 MAP3K7O43318 606 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 BUD23O43709 281 aaKnown RBP17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 PROSCO94903 275 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 SERPINC1P01008 464 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 FAM228BP0C875 321 aa17.55■□□□□ 0.4
CHCHD3-203ENST00000448878 MSH3P20585 1137 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms