RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ZSCAN5DPP0CG00 497 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 CCL4P13236 92 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 CD82P27701 267 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 RPL22P35268 128 aaKnown RBP10.98□□□□□ -0.65
RFFL-204ENST00000414419 KCNJ1P48048 391 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 GPR18Q14330 331 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 KRT33BQ14525 404 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 PLCL1Q15111 1095 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 RPE65Q16518 533 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 KLHL35Q6PF15 583 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 FAM83HQ6ZRV2 1179 aaPredicted RBP10.98□□□□□ -0.65
RFFL-204ENST00000414419 GPR155Q7Z3F1 870 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 GLIS1Q8NBF1 620 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 PPHLN1Q8NEY8 458 aaKnown RBP10.98□□□□□ -0.65
RFFL-204ENST00000414419 NAT14Q8WUY8 206 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 ART4Q93070 314 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 CRELD1Q96HD1 420 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 LINC00615Q96LM1 132 aaPredicted RBP10.98□□□□□ -0.65
RFFL-204ENST00000414419 C12orf66Q96MD2 445 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 CCM2Q9BSQ5 444 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 ASPSCR1Q9BZE9 553 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 B3GNT4Q9C0J1 378 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 WWP1Q9H0M0 922 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 IMP3Q9NV31 184 aaKnown RBP10.98□□□□□ -0.65
RFFL-204ENST00000414419 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 PDP2Q9P2J9 529 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 NBEAQ8NFP9 2946 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 SDK2Q58EX2 2172 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 ZFYVE26Q68DK2 2539 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 TRBV5-4A0A0C4DH59 114 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 C17orf113A0A1B0GUU1 675 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 C9orf172C9J069 976 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 F8W8V4 182 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 QSOX1O00391 747 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 CAPN5O15484 640 aaPredicted RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 KIF5CO60282 957 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 RASSF9O75901 435 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 AP2A2O94973 939 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 LIPCP11150 499 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 FGF3P11487 239 aaPredicted RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 MTHFD1P11586 935 aaKnown RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 PPARGP37231 505 aaPredicted RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 GRIA1P42261 906 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 NSG1P42857 185 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 PRLHRP49683 370 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 CDKN1CP49918 316 aaPredicted RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 RAB15P59190 212 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 PRAMEP78395 509 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 SARNPP82979 210 aaKnown RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 DCAF12Q5T6F0 453 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 TSTD2Q5T7W7 516 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 LYPLAL1Q5VWZ2 237 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 AFTPHQ6ULP2 937 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 CCDC81Q6ZN84 652 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 ARHGAP22Q7Z5H3 698 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 OR6P1Q8NGX9 317 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 HM13Q8TCT9 377 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 ZDHHC12Q96GR4 267 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 TGM7Q96PF1 710 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 RANBP9Q96S59 729 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 PRORYQ9H606 182 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 CASS4Q9NQ75 786 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 EIF2B3Q9NR50 452 aaKnown RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 OCIAD1Q9NX40 245 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 BFARQ9NZS9 450 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 ANAPC5Q9UJX4 755 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 ACSL6Q9UKU0 697 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 HEBP2Q9Y5Z4 205 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 CFAP20Q9Y6A4 193 aaKnown RBP10.97□□□□□ -0.65
RFFL-204ENST00000414419 COLEC10Q9Y6Z7 277 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 LAMA5O15230 3695 aa10.97□□□□□ -0.65
RFFL-204ENST00000414419 ITPR1Q14643 2758 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 MN1Q10571 1320 aaPredicted RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 IGLV3-16A0A075B6K0 115 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 TEX51A0A1B0GUA7 166 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 CCDC162PA2VCL2 907 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 EIF4E1BA6NMX2 242 aaKnown RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 B4E171 279 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 STMND1H3BQB6 276 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 IFRD1O00458 451 aaPredicted RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 TOX3O15405 576 aaPredicted RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 C9P02748 559 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 GSTM1P09488 218 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 PRSS56P0CW18 603 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 NDUFS1P28331 727 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 TSPAN7P41732 249 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 CAPZBP47756 277 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 NPY2RP49146 381 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 ARSDP51689 593 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 GFERP55789 205 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 SESN2P58004 480 aaPredicted RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 GSTM4Q03013 218 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 CLN3Q13286 438 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 ITIH4Q14624 930 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 DBN1Q16643 649 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 FASTKD1Q53R41 847 aaKnown RBP10.96□□□□□ -0.65
RFFL-204ENST00000414419 PCID2Q5JVF3 399 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 MANEAQ5SRI9 462 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 ARHGAP40Q5TG30 622 aa10.96□□□□□ -0.65
RFFL-204ENST00000414419 ARMC6Q6NXE6 501 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms