RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 LYNP07948 512 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ZNF28P17035 718 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 MAGEA4P43358 317 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 HNMTP50135 292 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 UCNP55089 124 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 FCHO2Q0JRZ9 810 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 MLC1Q15049 377 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 TRIP6Q15654 476 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CPSF6Q16630 551 aaKnown RBP eCLIP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CYP27C1Q4G0S4 372 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 MED27Q6P2C8 311 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CERS6Q6ZMG9 384 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 THAP5Q7Z6K1 395 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 AMIGO1Q86WK6 493 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SPEM1Q8N4L4 309 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 BOLLQ8N9W6 283 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ZSWIM2Q8NEG5 633 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 OR52K1Q8NGK4 314 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SORCS1Q8WY21 1168 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 DNAJC18Q9H819 358 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 TIMMDC1Q9NPL8 285 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 FMN2Q9NZ56 1722 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ADRA1DP25100 572 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 DAOAP59103 153 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SRP54P61011 504 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CBX3Q13185 183 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 LARS2Q15031 903 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 LNX2Q8N448 690 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 OR5T3Q8NGG3 340 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CENPIQ92674 756 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 USP6NLQ92738 828 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ARGFXA6NJG6 315 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CCRL2O00421 344 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 GRTP1Q5TC63 336 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ANKRD33Q7Z3H0 272 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 METTL16Q86W50 562 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 RTL3Q8N8U3 475 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SMYD1Q8NB12 490 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 FBXO36Q8NEA4 188 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ACTL9Q8TC94 416 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SLC25A36Q96CQ1 311 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 WWP1Q9H0M0 922 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 LTB4R2Q9NPC1 389 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SPATS2LQ9NUQ6 558 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CXXC1Q9P0U4 656 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ANKMY1Q9P2S6 941 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 ADAM21Q9UKJ8 722 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 KIF20BQ96Q89 1820 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 NSG1A0A0A6YYJ2 146 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CCDC22O60826 627 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 FARS2O95363 451 aaKnown RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 CXCR1P25024 350 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 NSG1P42857 185 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 PFKFB4Q16877 469 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SH3PXD2AQ5TCZ1 1133 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 IFI44Q8TCB0 444 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 GPER1Q99527 375 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 KLF6Q99612 283 aaPredicted RBP9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 FZD8Q9H461 694 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 RMI1Q9H9A7 625 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 FNIP2Q9P278 1114 aa9.08□□□□□ -0.96
LIMCH1-202ENST00000381753 SSU72P8A0A1W2PR75 194 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PRR23D1E9PI22 279 aaPredicted RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 FLRT2O43155 660 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PFDN1O60925 122 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CILPO75339 1184 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PRR23D2P0DMB1 279 aaPredicted RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 GRM7Q14831 915 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 NR1D2Q14995 579 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 RCN1Q15293 331 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CCDC142Q17RM4 750 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 SYNPOQ8N3V7 929 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 TMEM178AQ8NBL3 297 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 DNAJB14Q8TBM8 379 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ART4Q93070 314 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 C16orf70Q9BSU1 422 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PPP4R1LQ9P1A2 415 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 EIF3KQ9UBQ5 218 aaKnown RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 AMACRQ9UHK6 382 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 GPR160Q9UJ42 338 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 POLHQ9Y253 713 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 MYO9BQ13459 2157 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 EGFP01133 1207 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CDKN1CP49918 316 aaPredicted RBP9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 DECR1Q16698 335 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 GFOD2Q3B7J2 385 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 TMEM35AQ53FP2 167 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 POTEHQ6S545 545 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 PARM1Q6UWI2 310 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 LCLAT1Q6UWP7 414 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 RAB11FIP2Q7L804 512 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CILP2Q8IUL8 1156 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 NETO1Q8TDF5 533 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 MUCL1Q96DR8 90 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 TEKT5Q96M29 485 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 CASD1Q96PB1 797 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 RBCK1Q9BYM8 510 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 POMKQ9H5K3 350 aa9.07□□□□□ -0.96
LIMCH1-202ENST00000381753 ALG9Q9H6U8 611 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms