RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 CDYL2Q8N8U2 506 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 ZNF557Q8N988 423 aaPredicted RBP17.81■□□□□ 0.44
CD40-201ENST00000372276 LEMD2Q8NC56 503 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 FIBINQ8TAL6 211 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 MAGEB10Q96LZ2 347 aaPredicted RBP17.81■□□□□ 0.44
CD40-201ENST00000372276 PLEKHG4BQ96PX9 1271 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 SLC39A3Q9BRY0 314 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 SEMA6AQ9H2E6 1030 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 CD320Q9NPF0 282 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 TUBA8Q9NY65 449 aaPredicted RBP17.81■□□□□ 0.44
CD40-201ENST00000372276 CRLS1Q9UJA2 301 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 ANAPC2Q9UJX6 822 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 EIF3LQ9Y262 564 aaKnown RBP17.81■□□□□ 0.44
CD40-201ENST00000372276 MYRFQ9Y2G1 1151 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 SH3BP1Q9Y3L3 701 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 ANGPTL3Q9Y5C1 460 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 KIAA1671Q9BY89 1806 aa17.81■□□□□ 0.44
CD40-201ENST00000372276 GLYATL1P3A0A0U1RQE8 302 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 C1orf232A0A0U1RR37 186 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ABHD14A-ACY1A0A1B0GW23 586 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 EFCAB14O75071 495 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 GMNNO75496 209 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 H6PDO95479 791 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 TFAP2AP05549 437 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 JAK1P23458 1154 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 GSK3BP49841 420 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 SNRPD1P62314 119 aaKnown RBP17.8■□□□□ 0.44
CD40-201ENST00000372276 HMBOX1Q6NT76 420 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 IL27RAQ6UWB1 636 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 Q6ZSR9 355 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 SPPL2CQ8IUH8 684 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 CMTR2Q8IYT2 770 aaKnown RBP17.8■□□□□ 0.44
CD40-201ENST00000372276 TCAIMQ8N3R3 496 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ZBTB2Q8N680 514 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 OSCP1Q8WVF1 389 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 WBP2Q969T9 261 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ULK4Q96C45 1275 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 SH3GL1Q99961 368 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 TMEM79Q9BSE2 394 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 SLC29A3Q9BZD2 475 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 KCTD5Q9NXV2 234 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ASIC5Q9NY37 505 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 PTTG2Q9NZH5 202 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 GIMAP2Q9UG22 337 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 TRPS1Q9UHF7 1281 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 OGDHLQ9ULD0 1010 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 SLC8A2Q9UPR5 921 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 AURKCQ9UQB9 309 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 DMTF1Q9Y222 760 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 PCDHB3Q9Y5E6 796 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 CPQQ9Y646 472 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 HTTP42858 3142 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 C7orf72A4D263 438 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 TULP3O75386 442 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 KATNA1O75449 491 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 TIPRLO75663 272 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 CSPG5O95196 566 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 CAPN1P07384 714 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 EBLN1P0CF75 366 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 PRDX3P30048 256 aaKnown RBP17.8■□□□□ 0.44
CD40-201ENST00000372276 GRIA2P42262 883 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 NSG1P42857 185 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 CCL23P55773 120 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 UFM1P61960 85 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ECT2LQ008S8 904 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ATXN7L2Q5T6C5 722 aaPredicted RBP17.8■□□□□ 0.44
CD40-201ENST00000372276 SPNS2Q8IVW8 549 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ADGRG5Q8IZF4 528 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ARL14EPQ8N8R7 260 aaPredicted RBP17.8■□□□□ 0.44
CD40-201ENST00000372276 SNX31Q8N9S9 440 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 OR8J3Q8NGG0 315 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 PROKR1Q8TCW9 393 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ADAMTS19Q8TE59 1207 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ZNF689Q96CS4 500 aaPredicted RBP17.8■□□□□ 0.44
CD40-201ENST00000372276 PRPF18Q99633 342 aaKnown RBP17.8■□□□□ 0.44
CD40-201ENST00000372276 NTMT1Q9BV86 223 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 CD244Q9BZW8 370 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 IPPKQ9H8X2 491 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 OPTCQ9UBM4 332 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 PPIL1Q9Y3C6 166 aa17.8■□□□□ 0.44
CD40-201ENST00000372276 ZNF106Q9H2Y7 1883 aaKnown RBP17.79■□□□□ 0.44
CD40-201ENST00000372276 COL4A6Q14031 1691 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 SCN5AQ14524 2016 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 A0A1B0GTL3 188 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 AGAP14A8MT82 685 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 SLC25A14O95258 325 aaPredicted RBP17.79■□□□□ 0.44
CD40-201ENST00000372276 CTPS1P17812 591 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 ARL1P40616 181 aaPredicted RBP17.79■□□□□ 0.44
CD40-201ENST00000372276 ZFP36L2P47974 494 aaKnown RBP17.79■□□□□ 0.44
CD40-201ENST00000372276 PWP1Q13610 501 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 CAPRIN1Q14444 709 aaKnown RBP17.79■□□□□ 0.44
CD40-201ENST00000372276 NR6A1Q15406 480 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 NRF1Q16656 503 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 NHSL2Q5HYW2 709 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 GPRC6AQ5T6X5 926 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 NANOGP8Q6NSW7 305 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 LETMD1Q6P1Q0 360 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 FAM151BQ6UXP7 276 aa17.79■□□□□ 0.44
CD40-201ENST00000372276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.79■□□□□ 0.44
CD40-201ENST00000372276 SPRED1Q7Z699 444 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms