RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 DDHD1Q8NEL9 900 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 GFM2Q969S9 779 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 FAM131CQ96AQ9 280 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 AP2M1Q96CW1 435 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 CCDC126Q96EE4 140 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 PDLIM5Q96HC4 596 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 ELAC2Q9BQ52 826 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 WRAP53Q9BUR4 548 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 RIOK2Q9BVS4 552 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 CHRDQ9H2X0 955 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 TFB2MQ9H5Q4 396 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.9□□□□□ -0.5
USF1-203ENST00000368021 TUBA8Q9NY65 449 aaPredicted RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 SCML1Q9UN30 329 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 LAMTOR5O43504 91 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 TSPAN12O95859 305 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 C6P13671 934 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 HOXB2P14652 356 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 IL2P60568 153 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 RPS14P62263 151 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 B4GALNT1Q00973 533 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 LDLRAP1Q5SW96 308 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 CGB2Q6NT52 195 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 CLDN19Q8N6F1 224 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 SIDT2Q8NBJ9 832 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 TXNDC5Q8NBS9 432 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 PRSS33Q8NF86 280 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 CXorf40AQ8TE69 158 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 BTN2A2Q8WVV5 523 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 CCT6BQ92526 530 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 INPP5DQ92835 1189 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 KIAA1191Q96A73 305 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 FAM136AQ96C01 138 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 PANX3Q96QZ0 392 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 UTP6Q9NYH9 597 aaKnown RBP11.9□□□□□ -0.5
USF1-203ENST00000368021 GALPQ9UBC7 116 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 ZNF232Q9UNY5 417 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 PRSS21Q9Y6M0 314 aa11.9□□□□□ -0.5
USF1-203ENST00000368021 LAMA1P25391 3075 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 A0A1W2PQF6 199 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 FADS2P1A8MWK0 482 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 TMEM114B3SHH9 223 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 F8W8V4 182 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 QSOX1O00391 747 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 PLK4O00444 970 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 ZBTB14O43829 449 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 DLX3O60479 287 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 RECQL5O94762 991 aaPredicted RBP11.89□□□□□ -0.51
USF1-203ENST00000368021 AP2A2O94973 939 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 KLF8O95600 359 aaPredicted RBP11.89□□□□□ -0.51
USF1-203ENST00000368021 LINGO3P0C6S8 592 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 OR56A5P0C7T3 313 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 ATP1B2P14415 290 aaPredicted RBP11.89□□□□□ -0.51
USF1-203ENST00000368021 ATP5F1P24539 256 aaPredicted RBP11.89□□□□□ -0.51
USF1-203ENST00000368021 DNAJB13P59910 316 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 ZBTB16Q05516 673 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 TCF15Q12870 199 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 CCDC92Q53HC0 331 aaPredicted RBP11.89□□□□□ -0.51
USF1-203ENST00000368021 CES4AQ5XG92 561 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 KIAA1211LQ6NV74 962 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 ZCCHC23Q6ZST2 131 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 ARMCX6Q7L4S7 300 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 CCDC197Q8NCU1 140 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 STAG3L4Q8TBR4 150 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 GLYATL1Q969I3 302 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 PTERQ96BW5 349 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 NUS1Q96E22 293 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 SLC30A3Q99726 388 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 MKRN2Q9H000 416 aaKnown RBP11.89□□□□□ -0.51
USF1-203ENST00000368021 ALG9Q9H6U8 611 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 KLHL14Q9P2G3 628 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 TRPM6Q9BX84 2022 aa11.89□□□□□ -0.51
USF1-203ENST00000368021 IQCF5A8MTL0 148 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 EIF3FO00303 357 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 LZTS3O60299 673 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 MAGEC1O60732 1142 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 MMP20O60882 483 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 KERAO60938 352 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 SLC25A14O95258 325 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 TROVE2P10155 538 aaKnown RBP eCLIP11.88□□□□□ -0.51
USF1-203ENST00000368021 CXCL12P48061 93 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 SLC1A6P48664 564 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 PXNP49023 591 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 TAS2R38P59533 333 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 NFKB2Q00653 900 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 CSTF1Q05048 431 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 AGERQ15109 404 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 SLC22A9Q8IVM8 553 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 MAML2Q8IZL2 1156 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 SYNPOQ8N3V7 929 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 SPEM1Q8N4L4 309 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 HDDC3Q8N4P3 179 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 DCUN1D1Q96GG9 259 aa11.88□□□□□ -0.51
USF1-203ENST00000368021 RAB3IPQ96QF0 476 aaPredicted RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 UNKQ9C0B0 810 aaKnown RBP11.88□□□□□ -0.51
USF1-203ENST00000368021 RMI1Q9H9A7 625 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms