RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 COL6A2P12110 1019 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 PPARGP37231 505 aaPredicted RBP14.48□□□□□ -0.09
CXCL12-201ENST00000343575 DGKEP52429 567 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 IRX4P78413 519 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 LRRC32Q14392 662 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 CSHL1Q14406 222 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 KYAT3Q6YP21 454 aaKnown RBP14.48□□□□□ -0.09
CXCL12-201ENST00000343575 KBTBD6Q86V97 674 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 GJD3Q8N144 294 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 KLK6Q92876 244 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 STMN2Q93045 179 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 CLDN23Q96B33 292 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 NSL1Q96IY1 281 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 NELL2Q99435 816 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 TTC1Q99614 292 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 TRIM4Q9C037 500 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 POPDC3Q9HBV1 291 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 IKZF3Q9UKT9 509 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 RUVBL2Q9Y230 463 aaKnown RBP14.48□□□□□ -0.09
CXCL12-201ENST00000343575 COMMD10Q9Y6G5 202 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 A0A1W2PQU0 124 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 PRR23AA6NEV1 266 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 RAD51BO15315 384 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 INPP4BO15327 924 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 GLRBP48167 497 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 KCNC1P48547 511 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 SERPINB4P48594 390 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 RPS6KA3P51812 740 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 SEPT7Q16181 437 aaKnown RBP14.48□□□□□ -0.09
CXCL12-201ENST00000343575 CES4AQ5XG92 561 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 OR52E8Q6IFG1 317 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 OTOAQ7RTW8 1153 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 TRIM74Q86UV6 250 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 FSTL5Q8N475 847 aaPredicted RBP14.48□□□□□ -0.09
CXCL12-201ENST00000343575 TP53I13Q8NBR0 393 aaPredicted RBP14.48□□□□□ -0.09
CXCL12-201ENST00000343575 SGF29Q96ES7 293 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 NECAB3Q96P71 396 aaPredicted RBP14.48□□□□□ -0.09
CXCL12-201ENST00000343575 MECRQ9BV79 373 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 TRIM55Q9BYV6 548 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 CCDC68Q9H2F9 335 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 DLGAP2Q9P1A6 1054 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 ANGPTL2Q9UKU9 493 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 DHRS7Q9Y394 339 aa14.48□□□□□ -0.09
CXCL12-201ENST00000343575 G3V2L1 256 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 MAP3K7O43318 606 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 RNGTTO60942 597 aaKnown RBP14.47□□□□□ -0.09
CXCL12-201ENST00000343575 SLC25A14O95258 325 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-201ENST00000343575 IGLV3-19P01714 112 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 ACADMP11310 421 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 ATP1B2P14415 290 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-201ENST00000343575 ITGB6P18564 788 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 CHRM3P20309 590 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 SLC26A3P40879 764 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 CTSCP53634 463 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 RPS21P63220 83 aaKnown RBP14.47□□□□□ -0.09
CXCL12-201ENST00000343575 RAET1GQ6H3X3 334 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 PNCKQ6P2M8 343 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 DET1Q7L5Y6 550 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 HORMAD1Q86X24 394 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 RASGEF1AQ8N9B8 481 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 PJA1Q8NG27 643 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 LENG8Q96PV6 779 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-201ENST00000343575 IQCGQ9H095 443 aaKnown RBP14.47□□□□□ -0.09
CXCL12-201ENST00000343575 NMRAL1Q9HBL8 299 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 PREBQ9HCU5 417 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 POLMQ9NP87 494 aaPredicted RBP14.47□□□□□ -0.09
CXCL12-201ENST00000343575 GNPTGQ9UJJ9 305 aa14.47□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3DA0A087WVF3 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3IA0A087WXS9 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3EA0A087X179 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3KA0A087X1G2 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 WDR91A4D1P6 747 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3FA6NER0 549 aaPredicted RBP14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3LB9A6J9 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 F8W8V4 182 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TK2O00142 265 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 HGSO14964 777 aaPredicted RBP14.46□□□□□ -0.09
CXCL12-201ENST00000343575 ENTPD5O75356 428 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 VPS26AO75436 327 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 CBX6O95503 412 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 LTA4HP09960 611 aaKnown RBP14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3HP0C7X1 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 CD1DP15813 335 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 GPR1P46091 355 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TMEM115Q12893 351 aaPredicted RBP14.46□□□□□ -0.09
CXCL12-201ENST00000343575 PDAP1Q13442 181 aaKnown RBP14.46□□□□□ -0.09
CXCL12-201ENST00000343575 PCLAFQ15004 111 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 LDLRAP1Q5SW96 308 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3GQ6DHY5 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 PTRHD1Q6GMV3 140 aaKnown RBP14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3CQ6IPX1 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 KIAA1161Q6NSJ0 714 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 NAPRTQ6XQN6 538 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 LRRC74BQ6ZQY2 392 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 ISCA2Q86U28 154 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 LCA5Q86VQ0 697 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 TBC1D3Q8IZP1 549 aaPredicted RBP14.46□□□□□ -0.09
CXCL12-201ENST00000343575 FRMD1Q8N878 549 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 MCUR1Q96AQ8 359 aa14.46□□□□□ -0.09
CXCL12-201ENST00000343575 PTERQ96BW5 349 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms