RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 RAVER1Q8IY67 606 aaKnown RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 LIX1Q8N485 282 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 PQLC3Q8N755 202 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 RPL10LQ96L21 214 aaKnown RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 BCO2Q9BYV7 579 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CRISPLD1Q9H336 500 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 TOR3AQ9H497 397 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 OXSMQ9NWU1 459 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 ZDHHC2Q9UIJ5 367 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 SPATA2Q9UM82 520 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 ERVK-11Q9UQG0 969 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 N6AMT1Q9Y5N5 214 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 PSAT1Q9Y617 370 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 ZNF142P52746 1687 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CCDC162PA2VCL2 907 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 SLC6A2P23975 617 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 BUD31P41223 144 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CPTPQ5TA50 214 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 PIM3Q86V86 326 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 SERPINA9Q86WD7 417 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 FBXO27Q8NI29 283 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 GRPEL2Q8TAA5 225 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 PPCDCQ96CD2 204 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CCDC106Q9BWC9 280 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 TDRD1Q9BXT4 1180 aaKnown RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 TBC1D14Q9P2M4 693 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 RABL2AQ9UBK7 228 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 NDOR1Q9UHB4 597 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 MRPS23Q9Y3D9 190 aaKnown RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 ELOVL7A1L3X0 281 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 NFKBIEO00221 500 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 FPGTO14772 594 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 TSPAN4O14817 238 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 FFAR2O15552 330 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 TBX1O43435 398 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 NOBOXO60393 691 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 NPHS1O60500 1241 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 NUDT14O95848 222 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 PRLP01236 227 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 UROSP10746 265 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CACNG1Q06432 222 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 SLC10A7Q0GE19 358 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 HNRNPDQ14103 355 aaKnown RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 SLC9A5Q14940 896 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 C1orf220Q5T0J3 134 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 KIAA0408Q6ZU52 694 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 DENND1AQ8TEH3 1009 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 SLC35F5Q8WV83 523 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 TMIGD2Q96BF3 282 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 FEM1CQ96JP0 617 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 POLR3BQ9NW08 1133 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 ILVBLA1L0T0 632 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 hCG_2039718K7EN88 272 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CLPXO76031 633 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 THRBP10828 461 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 IFI30P13284 250 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CES1P23141 567 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 IGFBP5P24593 272 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 KIR3DL1P43629 444 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 RPIAP49247 311 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 NAE1Q13564 534 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 HERC3Q15034 1050 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 UGT2A3Q6UWM9 527 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 THAP5Q7Z6K1 395 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 OSTM1Q86WC4 334 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 CLIP3Q96DZ5 547 aa7.97□□□□□ -1.13
UBE4B-202ENST00000343090 KIAA1522Q9P206 1035 aaPredicted RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 MRPS7Q9Y2R9 242 aaKnown RBP7.97□□□□□ -1.13
UBE4B-202ENST00000343090 BCKDKO14874 412 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 SLC28A2O43868 658 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 IFNGR2P38484 337 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 CAPGP40121 348 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 ATP12AP54707 1039 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 INHBEP58166 350 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 YBEYP58557 167 aaPredicted RBP7.96□□□□□ -1.13
UBE4B-202ENST00000343090 SRP54P61011 504 aaKnown RBP7.96□□□□□ -1.13
UBE4B-202ENST00000343090 MERTKQ12866 999 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 RFX4Q33E94 735 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 KLHL12Q53G59 568 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 ZNF544Q6NX49 715 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 TUBA3EQ6PEY2 450 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 PTCHD4Q6ZW05 846 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 LRRC20Q8TCA0 184 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 PPP1R16AQ96I34 528 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 QRFPRQ96P65 431 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 OXCT2Q9BYC2 517 aaPredicted RBP7.96□□□□□ -1.13
UBE4B-202ENST00000343090 MAP10Q9P2G4 905 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 KDM3BQ7LBC6 1761 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 J3KR12 359 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 M0QX08 132 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 NRP1O14786 923 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 AURKAO14965 403 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 CLDN9O95484 217 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 CXCL14O95715 111 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 AHSGP02765 367 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 TCEA1P23193 301 aaKnown RBP7.96□□□□□ -1.13
UBE4B-202ENST00000343090 CTNNB1P35222 781 aa7.96□□□□□ -1.13
UBE4B-202ENST00000343090 AKR1D1P51857 326 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms