RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 APOL2Q9BQE5 337 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 ARHGAP9Q9BRR9 750 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 APMAPQ9HDC9 416 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 TRIM10Q9UDY6 481 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 KCTD3Q9Y597 815 aa17.38■□□□□ 0.37
HDDC3-201ENST00000330334 DDX3YO15523 660 aaKnown RBP17.37■□□□□ 0.37
HDDC3-201ENST00000330334 LDB2O43679 373 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 STK17BO94768 372 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 DLGAP3O95886 979 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 RALBP11234 206 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 AKT1P31749 480 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 LEPRP48357 1165 aaKnown RBP17.37■□□□□ 0.37
HDDC3-201ENST00000330334 ZNF140P52738 457 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-201ENST00000330334 OLIG2Q13516 323 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 NFE2L1Q14494 772 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 GPR33Q49SQ1 333 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 CRTC2Q53ET0 693 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-201ENST00000330334 FNBP1LQ5T0N5 605 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 CYB5D1Q6P9G0 228 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 TIPARPQ7Z3E1 657 aaKnown RBP17.37■□□□□ 0.37
HDDC3-201ENST00000330334 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
HDDC3-201ENST00000330334 RSC1A1Q92681 617 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 KIAA1143Q96AT1 154 aaPredicted RBP17.37■□□□□ 0.37
HDDC3-201ENST00000330334 HES6Q96HZ4 224 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 CATSPER2Q96P56 530 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 FAM118BQ9BPY3 351 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 STARD5Q9NSY2 213 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 FKBPLQ9UIM3 349 aa17.37■□□□□ 0.37
HDDC3-201ENST00000330334 C17orf113A0A1B0GUU1 675 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 GOLGA6L3A6NEY3 463 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 ZNF891A8MT65 544 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-201ENST00000330334 H7C0S8 307 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 PSMD3O43242 534 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 SGTAO43765 313 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 PTMAP06454 111 aaKnown RBP17.36■□□□□ 0.37
HDDC3-201ENST00000330334 MTHFD1P11586 935 aaKnown RBP17.36■□□□□ 0.37
HDDC3-201ENST00000330334 NELFEP18615 380 aaKnown RBP17.36■□□□□ 0.37
HDDC3-201ENST00000330334 CYP4F2P78329 520 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 CACHD1Q5VU97 1274 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 ARHGEF18Q6ZSZ5 1173 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 SNX20Q7Z614 316 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 NXPE1Q8N323 547 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 ESX1Q8N693 406 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 FAM71DQ8N9W8 422 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 OR13C4Q8NGS5 318 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 SLC35B2Q8TB61 432 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 UBXN4Q92575 508 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 DCUN1D1Q96GG9 259 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 CCM2Q9BSQ5 444 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 LRRC40Q9H9A6 602 aa17.36■□□□□ 0.37
HDDC3-201ENST00000330334 GPN2Q9H9Y4 310 aaPredicted RBP17.36■□□□□ 0.37
HDDC3-201ENST00000330334 IGLV3-16A0A075B6K0 115 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 RASSF9O75901 435 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 FGF5P12034 268 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 ITGB6P18564 788 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 ITGALP20701 1170 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 FOXM1Q08050 763 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 P3H1Q32P28 736 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 BPHLQ86WA6 291 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-201ENST00000330334 KMT5CQ86Y97 462 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 GPR150Q8NGU9 434 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 SLC41A2Q96JW4 573 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 FCRL4Q96PJ5 515 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 OR6C1Q96RD1 312 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 INSM2Q96T92 566 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-201ENST00000330334 CD180Q99467 661 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 COPS8Q99627 209 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 ADNPQ9H2P0 1102 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 GEMIN8Q9NWZ8 242 aaKnown RBP17.35■□□□□ 0.37
HDDC3-201ENST00000330334 CRLS1Q9UJA2 301 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 PSMD13Q9UNM6 376 aa17.35■□□□□ 0.37
HDDC3-201ENST00000330334 TRBV5-4A0A0C4DH59 114 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 LOC101059948A0A1B0GTJ6 334 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 CFAP99D6REC4 459 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 J3QKU1 62 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 KIF1CO43896 1103 aaKnown RBP17.34■□□□□ 0.37
HDDC3-201ENST00000330334 METTL18O95568 372 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 ATP1B2P14415 290 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-201ENST00000330334 PSMA3P25788 255 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 STIP1P31948 543 aaKnown RBP17.34■□□□□ 0.37
HDDC3-201ENST00000330334 STAT5AP42229 794 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 PRLHRP49683 370 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 SEPHS1P49903 392 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 SH3BP2P78314 561 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 MC1RQ01726 317 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 SPARCL1Q14515 664 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.34■□□□□ 0.37
HDDC3-201ENST00000330334 CAPRIN2Q6IMN6 1127 aaKnown RBP17.34■□□□□ 0.37
HDDC3-201ENST00000330334 IRGCQ6NXR0 463 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 BORAQ6PGQ7 559 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 DET1Q7L5Y6 550 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 CARFQ8N187 725 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 FRMD8P1Q9BZ68 369 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-201ENST00000330334 ULBP3Q9BZM4 244 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 KIR3DX1Q9H7L2 352 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 TUBD1Q9UJT1 453 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 PACSIN2Q9UNF0 486 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-201ENST00000330334 COLEC10Q9Y6Z7 277 aa17.34■□□□□ 0.37
HDDC3-201ENST00000330334 OR5K3A6NET4 321 aa17.33■□□□□ 0.36
HDDC3-201ENST00000330334 AP2A1O95782 977 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms