RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FZD3Q9NPG1 666 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 PHPT1Q9NRX4 125 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 TP53BP1Q12888 1972 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 EIF3FO00303 357 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 CHUKO15111 745 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 CDK14O94921 469 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 FTH1P02794 183 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 APOA4P06727 396 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 MYCLP1P12525 358 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 TDGF1P13385 188 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 HNRNPA2B1P22626 353 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 SERPINB4P48594 390 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 PXNP49023 591 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 KPNA2P52292 529 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 KIAA1024LP59773 190 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 ATP6V0D1P61421 351 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 PLEKHS1Q5SXH7 462 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 TMEM220Q6QAJ8 160 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 GCNT7Q6ZNI0 430 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 ISCA2Q86U28 154 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 ZNF547Q8IVP9 402 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 CPNE9Q8IYJ1 553 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 FSTL5Q8N475 847 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 FRMD1Q8N878 549 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 TMEM145Q8NBT3 493 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 RDH11Q8TC12 318 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 EEF1AKMT1Q8WVE0 214 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 RLN3Q8WXF3 142 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 FOXJ1Q92949 421 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 LINGO1Q96FE5 620 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 BMFQ96LC9 184 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 LINC00615Q96LM1 132 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 UHRF1Q96T88 793 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 MRPL57Q9BQC6 102 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 ORAI3Q9BRQ5 295 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 APOOQ9BUR5 198 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 TSSK1BQ9BXA7 367 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 GPR174Q9BXC1 333 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 CAPS2Q9BXY5 557 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 TFB2MQ9H5Q4 396 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 SARS2Q9NP81 518 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 PRMT8Q9NR22 394 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 IKZF3Q9UKT9 509 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 GPR34Q9UPC5 381 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 DMTF1Q9Y222 760 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 TMEM98Q9Y2Y6 226 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 HS3ST3A1Q9Y663 406 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 SDK1Q7Z5N4 2213 aa14.51□□□□□ -0.09
SHKBP1-211ENST00000595945 TNRC6BQ9UPQ9 1833 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 ARHGEF17Q96PE2 2063 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 CCDC189A1A4V9 331 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 POM121BA6NF01 834 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 TMEM221A6NGB7 291 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 OR2AG2A6NM03 316 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 A6NNZ2 444 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 GPR89AB7ZAQ6 455 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 G3V2L1 256 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 M0R296 226 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 AXIN1O15169 862 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 BIRC5O15392 142 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 ZBTB14O43829 449 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 NUAK1O60285 661 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 SHOX2O60902 331 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 GPC4O75487 556 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 BPGMP07738 259 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 RBP1P09455 135 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 GSTM1P09488 218 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 GPR89BP0CG08 455 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 CBSLP0DN79 551 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 DGKAP23743 735 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 AKT2P31751 481 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 CBSP35520 551 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 IL2P60568 153 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 PFN3P60673 137 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 IL9RQ01113 521 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 GSTM4Q03013 218 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 GTF2H3Q13889 308 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 PCLAFQ15004 111 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 SEPT7Q16181 437 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 TTLL9Q3SXZ7 439 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 TUBB8Q3ZCM7 444 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 ACSBG2Q5FVE4 666 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 XKR5Q6UX68 686 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 CYHR1Q6ZMK1 362 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 OTOAQ7RTW8 1153 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 C11orf96Q7Z7L8 435 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 FAM160A2Q8N612 972 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 BEND7Q8N7W2 519 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 RHEBL1Q8TAI7 183 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 KIAA1191Q96A73 305 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 PTERQ96BW5 349 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 SCARF2Q96GP6 870 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 CCM2Q9BSQ5 444 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 UNKQ9C0B0 810 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 MRPL46Q9H2W6 279 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 XPR1Q9UBH6 696 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 OR1A2Q9Y585 309 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 CACNA1EQ15878 2313 aa14.5□□□□□ -0.09
SHKBP1-211ENST00000595945 CCDC163A0A0D9SF12 145 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms