RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 LINC00523Q86TU6 105 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 NXPE1Q8N323 547 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 USP7Q93009 1102 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 ULK4Q96C45 1275 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 CDKN2AIPNLQ96HQ2 116 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 DPH1Q9BZG8 443 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 OGFRQ9NZT2 677 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 ACSL6Q9UKU0 697 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 DRG1Q9Y295 367 aaKnown RBP21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 SDK2Q58EX2 2172 aa21.91■■□□□ 1.1
GTF2F1-204ENST00000594965 TRBV5-4A0A0C4DH59 114 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 MROH6A6NGR9 719 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 C9orf172C9J069 976 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 NVLO15381 856 aaKnown RBP21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 KLK10O43240 276 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 PRAMEF10O60809 474 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 VIPP01282 170 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 PRSS56P0CW18 603 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 ITGALP20701 1170 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 PBLDP30039 288 aaPredicted RBP21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 CXCR5P32302 372 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 MAPK9P45984 424 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 MAPK10P53779 464 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 SEMA5AQ13591 1074 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 BCL7AQ4VC05 210 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 JAMLQ86YT9 394 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 STYXQ8WUJ0 223 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 NCSTNQ92542 709 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 ZNF514Q96K75 400 aaPredicted RBP21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 SLC40A1Q9NP59 571 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 POT1Q9NUX5 634 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 ZKSCAN5Q9Y2L8 839 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 FAM208BQ5VWN6 2430 aa21.9■■□□□ 1.1
GTF2F1-204ENST00000594965 MGAT4DA6NG13 374 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 CEP104O60308 925 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 FGF3P11487 239 aaPredicted RBP21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 RPL22P35268 128 aaKnown RBP21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 ARSDP51689 593 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 CDH17Q12864 832 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 CLN3Q13286 438 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 SEPT6Q14141 434 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 METRNLQ641Q3 311 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 ARHGAP22Q7Z5H3 698 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 TRIM48Q8IWZ4 208 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 REXO1L1PQ8IX06 675 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 PMEPA1Q969W9 287 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 LINC00615Q96LM1 132 aaPredicted RBP21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 RAB6BQ9NRW1 208 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 FOXJ2Q9P0K8 574 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 PAK5Q9P286 719 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 NBEAQ8NFP9 2946 aa21.89■■□□□ 1.09
GTF2F1-204ENST00000594965 IGLV3-16A0A075B6K0 115 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 CCDC78A2IDD5 438 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 GOLGA6L3A6NEY3 463 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 KCNJ1P48048 391 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 PPM1FP49593 454 aaPredicted RBP21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 GPR33Q49SQ1 333 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 CCDC38Q502W7 563 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 CCDC89Q8N998 374 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 GPR150Q8NGU9 434 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 OR2L2Q8NH16 312 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 KCNF1Q9H3M0 494 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 EPB41L1Q9H4G0 881 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 CASS4Q9NQ75 786 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 OCIAD1Q9NX40 245 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 ZDHHC3Q9NYG2 299 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 AKAP7Q9P0M2 348 aaPredicted RBP21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 PSMD13Q9UNM6 376 aa21.88■■□□□ 1.09
GTF2F1-204ENST00000594965 MN1Q10571 1320 aaPredicted RBP21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 A8MU76 341 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 ATP1B2P14415 290 aaPredicted RBP21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 ACRV1P26436 265 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 PRLHRP49683 370 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 GFERP55789 205 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 GPR18Q14330 331 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 RPE65Q16518 533 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 KCTD19Q17RG1 926 aaPredicted RBP21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 ZRANB3Q5FWF4 1079 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 SNAP47Q5SQN1 464 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 SERPINA9Q86WD7 417 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 PIANPQ8IYJ0 282 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 BMPERQ8N8U9 685 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 DNAAF3Q8N9W5 541 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 AGBL5Q8NDL9 886 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 CXorf40BQ96DE9 158 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 COPS8Q99627 209 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 B3GNT4Q9C0J1 378 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 ZMYND15Q9H091 742 aa21.87■■□□□ 1.09
GTF2F1-204ENST00000594965 E7EVH7 732 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 UBXN7O94888 489 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 C9P02748 559 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 TYRP1P17643 537 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 CSTF2P33240 577 aaKnown RBP eCLIP21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 HALP42357 657 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 LMAN1P49257 510 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 TGIF1Q15583 401 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 PPP1R21Q6ZMI0 780 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 ZFAND4Q86XD8 727 aa21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 LILRA3Q8N6C8 439 aaPredicted RBP21.86■■□□□ 1.09
GTF2F1-204ENST00000594965 PRELID2Q8N945 189 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms