RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 LINC00696Q6ZRV3 163 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 CLEC20AQ6ZU45 233 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 CBWD2Q8IUF1 395 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 CCDC71Q8IV32 467 aaPredicted RBP4.85□□□□□ -1.63
ERCC1-216ENST00000592444 BRSK2Q8IWQ3 736 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 NELFCDQ8IXH7 590 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 SHISA5Q8N114 240 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 MYCT1Q8N699 235 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 MYRIPQ8NFW9 859 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 RASSF8Q8NHQ8 419 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 PARD3BQ8TEW8 1205 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 NOC3LQ8WTT2 800 aaKnown RBP4.85□□□□□ -1.63
ERCC1-216ENST00000592444 FUBP1Q96AE4 644 aaKnown RBP4.85□□□□□ -1.63
ERCC1-216ENST00000592444 PERPQ96FX8 193 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 CCDC34Q96HJ3 373 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 C9orf72Q96LT7 481 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 CCDC114Q96M63 670 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 AGAP4Q96P64 663 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 DNAJC7Q99615 494 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 FAM213AQ9BRX8 229 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 NAT10Q9H0A0 1025 aaKnown RBP4.85□□□□□ -1.63
ERCC1-216ENST00000592444 TKTL2Q9H0I9 626 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 XYLT2Q9H1B5 865 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 MRPL44Q9H9J2 332 aaKnown RBP4.85□□□□□ -1.63
ERCC1-216ENST00000592444 KCND1Q9NSA2 647 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 TAB2Q9NYJ8 693 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 IFNKQ9P0W0 207 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 PTGFRNQ9P2B2 879 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 CBLCQ9ULV8 474 aa4.85□□□□□ -1.63
ERCC1-216ENST00000592444 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
ERCC1-216ENST00000592444 MBD3L4A6NDZ8 208 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 MBD3L5A6NJ08 208 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 LRRIQ3A6PVS8 624 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 SMTNL1A8MU46 457 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 K7ERQ8 282 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 O00370 1275 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 CTIFO43310 598 aaKnown RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 HTRA2O43464 458 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 EIF4EBP3O60516 100 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 MFAP3LO75121 409 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 PMPCBO75439 489 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 RASAL1O95294 804 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 MATN4O95460 622 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 VNN1O95497 513 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 MT-CO1P00395 513 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 IGHEP01854 428 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 LTFP02788 710 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 FAM163BP0C2L3 166 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 SRCP12931 536 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ABOP16442 354 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 DEKP35659 375 aaKnown RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ETV3P41162 512 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 KLK7P49862 253 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 YWHAGP61981 247 aaKnown RBP eCLIP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 TNNC1P63316 161 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 DLG4P78352 724 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 PMP22Q01453 160 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 POU4F1Q01851 419 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 APBA1Q02410 837 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ILF3Q12906 894 aaKnown RBP eCLIP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 SLC12A1Q13621 1099 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 PSMD6Q15008 389 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 LRRC14Q15048 493 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ASTE1Q2TB18 679 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 WSCD2Q2TBF2 565 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 WDR72Q3MJ13 1102 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 HSP90AA4PQ58FG1 418 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 CBLL1Q75N03 491 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 PLXDC1Q8IUK5 500 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 MARVELD2Q8N4S9 558 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 C12orf29Q8N999 325 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 SLC38A9Q8NBW4 561 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 C2CD4AQ8NCU7 369 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 OR5B17Q8NGF7 314 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 FBLIM1Q8WUP2 373 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 POMGNT1Q8WZA1 660 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 HDAC10Q969S8 669 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 SAAL1Q96ER3 474 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ANKRD36BP1Q96IX9 119 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 TNIP3Q96KP6 325 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 IP6K3Q96PC2 410 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ACCSQ96QU6 501 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 TUBGCP2Q9BSJ2 902 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 MLPHQ9BV36 600 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 GSDMCQ9BYG8 508 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 TNKS2Q9H2K2 1166 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 NDST4Q9H3R1 872 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ZNF696Q9H7X3 374 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 PDE11AQ9HCR9 933 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 PLCB1Q9NQ66 1216 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 WASH6PQ9NQA3 447 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 FAM49BQ9NUQ9 324 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 P4HTMQ9NXG6 502 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 RBAKQ9NYW8 714 aaPredicted RBP4.84□□□□□ -1.63
ERCC1-216ENST00000592444 RARRES3Q9UL19 164 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 COQ6Q9Y2Z9 468 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 ST14Q9Y5Y6 855 aa4.84□□□□□ -1.63
ERCC1-216ENST00000592444 DOCK10Q96BY6 2186 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms